Anchorpoints
- Gene id
- AT5G25040
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G10800 | RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), mRNA splicing factor, Cwf21 (InterPro:IPR013170), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G25060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RNA recognition motif (RRM)-containing protein | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G25110 | No description available. | scaffold_6 | + | View |
AL6G10550 | No description available. | scaffold_6 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G37020 | No description available. | A02 | - | View |
BR09G03050 | No description available. | A09 | - | View |
BR06G26260 | No description available. | A06 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G13500 | No description available. | Chr8 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00014G06720 | No description available. | CM3.5_scaffold00014 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G22170 | No description available. | scaffold_6 | + | View |
CRU_006G09070 | No description available. | scaffold_6 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00025G01230 | No description available. | scaffold00025 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G31320 | No description available. | scaffold_3 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G52440 | U2-associated protein SR140 (probable) | LG2 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G11950 | No description available. | Chr10 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03049G00590 | No description available. | scaffold03049 | + | View |
ME00847G02420 | No description available. | scaffold00847 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G014250 | folate/biopterin transporter | chr1 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29848G00770 | No description available. | 29848 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G006680 | Folate/biopterin transporter (AHRD V1 **** B4B3T5_9CHRO)%3B contains Interpro domain(s) IPR004324 Biopterin transport-related protein BT1 | ch08 | + | View |
SL06G068560 | Folate/biopterin transporter (AHRD V1 **** B5W6N2_SPIMA)%3B contains Interpro domain(s) IPR004324 Biopterin transport-related protein BT1 | ch06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G01350 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G32640 | similar to AT5G10820|integral membrane transporter family protein | ch6-6 | + | View |
TP2G22460 | similar to AT5G25060|RNA recognition motif (RRM)-containing protein | ch2-4 | + | View |