Anchorpoints

Gene id
AT5G20730
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G19220auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). auxin response factor 19 Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G20170No description available.scaffold_1-View
AL6G21060No description available.scaffold_6-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G14560No description available.A10+View
BR06G13770No description available.A06-View
BR02G10380No description available.A02-View
BR09G45760No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G14330No description available.Bvchr8.sca017+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G17640No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00003G08020No description available.CM3.5_scaffold00003+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G18550No description available.scaffold_6-View
CRU_001G18020No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00013G02060No description available.scaffold00013+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G25750No description available.scaffold_3+View
EG0001G17170No description available.scaffold_1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G10790Auxin response factor 19 (similar to)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G08350No description available.Gm09-View
GM17G05220No description available.Gm17+View
GM13G17270No description available.Gm13-View
GM15G19980No description available.Gm15-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G09130No description available.Chr10-View
GR01G01700No description available.Chr01-View
GR09G03710No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G036930No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G015950No description available.15+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10114G00200No description available.scaffold10114-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G043250auxin response factor 2chr2-View
MT4G124900auxin response factor 2chr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G21400No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G06300No description available.Chr18+View
PT06G13850No description available.Chr06+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29739G01480No description available.29739+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G042260Auxin response factor 1 (AHRD V1 *-*- Q6L8U3_CUCSA)%3B contains Interpro domain(s) IPR010525 Auxin response factorch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G016400Auxin response factor 1 (AHRD V1 *-*- Q6L8U3_CUCSA); contains Interpro domain(s) IPR010525 Auxin response factorchr07+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G06870No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G17120similar to AT1G19220|ARF19 (AUXIN RESPONSE FACTOR 19)ch1-1-View
TP6G23750similar to AT5G20730|NPH4 (NON-PHOTOTROPHIC HYPOCOTYL)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G02170name=GSVIVG01015035001;chr11+View


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Gene id
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Description
Chromosome
Strand