Anchorpoints

Gene id
AT5G15840
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G02380CONSTANS-like 2 CONSTANS-like 2 (COL2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of flower development; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G15840.1); Has 3185 Blast hits to 2478 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2995; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins3-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G01500No description available.scaffold_3-View
AL6G15680No description available.scaffold_6-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G07680No description available.A02-View
BR03G28890No description available.A03-View
BR01G34930No description available.A01-View
BR10G19340No description available.A10+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G08890No description available.Bvchr2.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G17120No description available.Chr7+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G13660No description available.scaffold_6-View
CRU_003G01400No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00030G00430No description available.scaffold00030+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G17640No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G41490Zinc finger protein CONSTANS-LIKE 2 (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G51320No description available.Gm18-View
GM13G07030No description available.Gm13-View
GM19G05170No description available.Gm19-View
GM08G28370No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G10460No description available.Chr03-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G005920No description available.17-View
MD09G005600No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04043G01430No description available.scaffold04043+View
ME06871G01030No description available.scaffold06871+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G22420No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G089500Tomato CONSTANS-like 2ch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G033400CONSTANS (Fragment) (AHRD V1 ***- A6YCH7_SOLTU); contains Interpro domain(s) IPR010402 CCT domainchr02+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G01430similar to AT3G02380|COL2 (constans-like 2)ch3-1-View
TP6G28260similar to AT5G15850|COL1 (constans-like 1)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G15750name=GSVIVG01036499001;chr14+View


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Gene id
Species
Description
Chromosome
Strand