Anchorpoints

Gene id
AT5G14420
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G01650Encodes RGLG1 (RING domain ligase 1), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. RING domain ligase1 (RGLG1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation, cytokinin metabolic process, auxin metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase2 (TAIR:AT5G14420.2); Has 24426 Blast hits to 13505 proteins in 916 species: Archae - 24; Bacteria - 3147; Metazoa - 7235; Fungi - 3380; Plants - 4548; Viruses - 743; Other Eukaryotes - 5349 (source: NCBI BLink). RING domain ligase13+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G14200No description available.scaffold_6-View
AL3G00460No description available.scaffold_3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G05920No description available.A03-View
BR03G28440No description available.A03-View
BR02G06920No description available.A02-View
BR10G20240No description available.A10+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G19860No description available.Chr9-View
CL10G11880No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00098G00180No description available.CM3.5_scaffold00098+View
CM00048G01290No description available.CM3.5_scaffold00048-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00130G00700No description available.supercontig_130-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G00390No description available.scaffold_3-View
CRU_006G12310No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00252G00130No description available.scaffold00252-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G19640No description available.scaffold_10+View
EG0009G14420No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G40170E3 ubiquitin-protein ligase RGLG1 (similar to)scf0513124+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G18500No description available.Gm06-View
GM16G07400No description available.Gm16-View
GM19G22800No description available.Gm19-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G03490No description available.Chr06+View
GR12G06570No description available.Chr12+View
GR01G26680No description available.Chr01+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G001390No description available.17-View
MD09G001530No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05335G00110No description available.scaffold05335-View
ME04137G00400No description available.scaffold04137+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G033100E3 ubiquitin-protein ligase RGLG2-like proteinchr7-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G27200No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G34220No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29633G00530No description available.29633-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G093520Copine-like protein (AHRD V1 ***- Q153E2_ORYSJ)%3B contains Interpro domain(s) IPR010734 Copinech02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G036690Copine-like protein (AHRD V1 ***- Q153E2_ORYSJ); contains Interpro domain(s) IPR010734 Copinechr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G02080No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G00400similar to AT3G01650|RGLG1 (RING domain Ligase1)ch3-1-View
TP6G29600similar to AT5G14420|RGLG2 (RING domain Ligase2)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G10820name=GSVIVG01032380001;chr14+View


Download

Gene id
Species
Description
Chromosome
Strand