Anchorpoints

Gene id
AT5G08300
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G23250Succinyl-CoA ligase, alpha subunit Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), CoA-binding (InterPro:IPR003781), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G08300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G23020No description available.scaffold_6+View
AL6G08020No description available.scaffold_6+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00029G00460No description available.scaffold00029-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G26020No description available.A10+View
BR03G03220No description available.A03+View
BR02G05010No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G11040No description available.Bvchr9.sca001+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00000G01130No description available.supercontig_0-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G20390No description available.scaffold_6+View
CRU_006G07030No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00157G00170No description available.scaffold00157-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G21120No description available.Chr05+View
GR13G06920No description available.Chr13-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G09140No description available.Chr05-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G15220No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G34660similar to AT5G08300|succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativech6-6-View
TP2G23900similar to AT5G23250|succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativech2-4-View


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Chromosome
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