Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G03290
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G09810 | isocitrate dehydrogenase VI Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase isocitrate dehydrogenase VI (IDH-VI); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase V (TAIR:AT5G03290.1); Has 17175 Blast hits to 17053 proteins in 2733 species: Archae - 398; Bacteria - 9669; Metazoa - 935; Fungi - 952; Plants - 360; Viruses - 0; Other Eukaryotes - 4861 (source: NCBI BLink). | 3 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL6G02420 | No description available. | scaffold_6 | + | View |
| AL3G10020 | No description available. | scaffold_3 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G00800 | No description available. | A03 | - | View |
| BR10G28020 | No description available. | A10 | - | View |
| BR02G03240 | No description available. | A02 | + | View |
| BR05G32470 | No description available. | A05 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL04G09010 | No description available. | Chr4 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00022G00220 | No description available. | CM3.5_scaffold00022 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G08520 | No description available. | scaffold_3 | + | View |
| CRU_006G02090 | No description available. | scaffold_6 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0001G09150 | No description available. | scaffold_1 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G49060 | Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial, Precursor (similar to) | LG6 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM10G06590 | No description available. | Gm10 | - | View |
| GM13G20790 | No description available. | Gm13 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR06G16590 | No description available. | Chr06 | - | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ5G011500 | No description available. | chr5 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD04G006430 | No description available. | 4 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11069G00100 | No description available. | scaffold11069 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G064070 | NAD-dependent isocitrate dehydrogenase | chr1 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G24410 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT16G09120 | No description available. | Chr16 | + | View |
| PT06G12670 | No description available. | Chr06 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30078G01090 | No description available. | 30078 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0005G05950 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G08140 | similar to AT3G09810|isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative | ch3-1 | + | View |
| TP6G39450 | similar to AT5G03290|isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative | ch6-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G03030 | name=GSVIVG01025704001; | chr8 | - | View |