Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G02450
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G37600 | Ribosomal protein L36e family protein Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 755 Blast hits to 754 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). | 2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL6G01590 | No description available. | scaffold_6 | + | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00012G01080 | No description available. | scaffold00012 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR04G22460 | No description available. | A04 | - | View |
| BR05G07680 | No description available. | A05 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_004G18930 | No description available. | scaffold_4 | - | View |
| CRU_005G19100 | No description available. | scaffold_5 | - | View |
| CRU_006G01220 | No description available. | scaffold_6 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G13330 | 60S ribosomal protein L36-2 (similar to) | LG6 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD04G009290 | No description available. | 4 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS05G38520 | 60S ribosomal protein L36-2, putative, expressed | 5 | + | View |
| OS01G62350 | 60S ribosomal protein L36-2, putative, expressed | 1 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G26130 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G08640 | similar to AT3G53740|60S ribosomal protein L36 (RPL36B) | ch5-1 | + | View |
| TP4G19960 | similar to AT2G37600|60S ribosomal protein L36 (RPL36A) | ch4-6 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM06G25770 | LOC100284257 | 6 | + | View |