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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AT4G39030
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G21340 | MATE efflux family protein MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G39030.1); Has 7799 Blast hits to 7783 proteins in 1733 species: Archae - 152; Bacteria - 6456; Metazoa - 30; Fungi - 49; Plants - 387; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). | 2 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G00950 | No description available. | scaffold_7 | + | View |
| AL4G00510 | No description available. | scaffold_4 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR01G00220 | No description available. | A01 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV9G12650 | No description available. | Bvchr9.sca026 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL11G14920 | No description available. | Chr11 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00059G01640 | No description available. | CM3.5_scaffold00059 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00150G00360 | No description available. | supercontig_150 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G00820 | No description available. | scaffold_7 | + | View |
| CRU_004G00390 | No description available. | scaffold_4 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G12590 | No description available. | scaffold_7 | - | View |
| EG0009G10520 | No description available. | scaffold_9 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM11G11970 | No description available. | Gm11 | + | View |
| GM12G04228 | No description available. | Gm12 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR05G24740 | No description available. | Chr05 | - | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ3G047580 | No description available. | chr3 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02994G00270 | No description available. | scaffold02994 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT4G071370 | MATE efflux family protein | chr4 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT09G12260 | No description available. | Chr09 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30131G02580 | No description available. | 30131 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL10G054100 | EDS5 (AHRD V1 ***- D6BM32_SOYBN)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE | ch10 | - | View |
| SL01G110280 | DNA-damage-inducible protein F (AHRD V1 **-- B4V9L8_9ACTO)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE | ch01 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST01G047700 | MATE efflux family protein (AHRD V1 ***- D7CWB4_TRURR); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE | chr01 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G07340 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP4G00520 | similar to AT2G21340|antiporter/ drug transporter | ch4-1 | + | View |
| TP7G36800 | similar to AT4G39030|EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5) | ch7-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV03G06110 | name=GSVIVG01024199001; | chr3 | - | View |