Anchorpoints
- Gene id
- AT4G37760
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G22830 | squalene epoxidase 2 (SQE2); FUNCTIONS IN: squalene monooxygenase activity, electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 3 (TAIR:AT4G37760.1); Has 2838 Blast hits to 2834 proteins in 830 species: Archae - 46; Bacteria - 1617; Metazoa - 134; Fungi - 223; Plants - 197; Viruses - 0; Other Eukaryotes - 621 (source: NCBI BLink). squalene epoxidase 2 | 2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G02310 | No description available. | scaffold_4 | - | View |
AL7G02850 | No description available. | scaffold_7 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G01190 | No description available. | A01 | - | View |
BR04G12940 | No description available. | A04 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G23910 | No description available. | Bvchr6.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G16350 | No description available. | Chr8 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00029G02230 | No description available. | CM3.5_scaffold00029 | + | View |
CM00014G01290 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00129G00670 | No description available. | supercontig_129 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G01860 | No description available. | scaffold_4 | - | View |
CRU_007G02320 | No description available. | scaffold_7 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00006G00600 | No description available. | scaffold00006 | - | View |
CS00004G03870 | No description available. | scaffold00004 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G18070 | No description available. | scaffold_6 | - | View |
EG0009G05330 | No description available. | scaffold_9 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G32190 | Squalene monooxygenase (SE) (similar to) | LG2 | + | View |
FV0G20040 | Squalene monooxygenase (SE) (similar to) | scf0513160 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM14G10290 | No description available. | Gm14 | + | View |
GM06G05200 | No description available. | Gm06 | + | View |
GM04G05110 | No description available. | Gm04 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G02850 | No description available. | Chr10 | + | View |
GR09G22240 | No description available. | Chr09 | + | View |
GR07G22690 | No description available. | Chr07 | + | View |
GR03G03250 | No description available. | Chr03 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD15G001410 | No description available. | 15 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07996G00090 | No description available. | scaffold07996 | - | View |
ME03299G00110 | No description available. | scaffold03299 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G103510 | squalene epoxidase | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G22530 | No description available. | scaffold_6 | - | View |
PPE_001G42310 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G11450 | No description available. | Chr02 | + | View |
PT07G00760 | No description available. | Chr07 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G00510 | No description available. | 30170 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G077440 | Squalene monooxygenase (AHRD V1 ***- Q506K3_DATIN)%3B contains Interpro domain(s) IPR013698 Squalene epoxidase | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G030380 | Squalene monooxygenase (AHRD V1 **** Q506K3_DATIN); contains Interpro domain(s) IPR013698 Squalene epoxidase | chr04 | - | View |
ST02G011310 | Squalene monooxygenase (AHRD V1 **** Q506K3_DATIN); contains Interpro domain(s) IPR013698 Squalene epoxidase | chr02 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G07450 | No description available. | scaffold_1 | + | View |
TC0008G07990 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G01850 | similar to AT2G22830|SQE2 (squalene epoxidase 2) | ch4-1 | - | View |
TP7G35410 | similar to AT4G37760|SQE3 (squalene epoxidase 3) | ch7-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G05490 | name=GSVIVG01009287001; | chr18 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G25330 | LOC100285558 | 9 | - | View |