Anchorpoints

Gene id
AT4G37760
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G22830squalene epoxidase 2 (SQE2); FUNCTIONS IN: squalene monooxygenase activity, electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 3 (TAIR:AT4G37760.1); Has 2838 Blast hits to 2834 proteins in 830 species: Archae - 46; Bacteria - 1617; Metazoa - 134; Fungi - 223; Plants - 197; Viruses - 0; Other Eukaryotes - 621 (source: NCBI BLink). squalene epoxidase 22-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G02310No description available.scaffold_4-View
AL7G02850No description available.scaffold_7-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G01190No description available.A01-View
BR04G12940No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G23910No description available.Bvchr6.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G16350No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00029G02230No description available.CM3.5_scaffold00029+View
CM00014G01290No description available.CM3.5_scaffold00014-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00129G00670No description available.supercontig_129-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G01860No description available.scaffold_4-View
CRU_007G02320No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G00600No description available.scaffold00006-View
CS00004G03870No description available.scaffold00004+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G18070No description available.scaffold_6-View
EG0009G05330No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G32190Squalene monooxygenase (SE) (similar to)LG2+View
FV0G20040Squalene monooxygenase (SE) (similar to)scf0513160+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G10290No description available.Gm14+View
GM06G05200No description available.Gm06+View
GM04G05110No description available.Gm04+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G02850No description available.Chr10+View
GR09G22240No description available.Chr09+View
GR07G22690No description available.Chr07+View
GR03G03250No description available.Chr03+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G001410No description available.15-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07996G00090No description available.scaffold07996-View
ME03299G00110No description available.scaffold03299-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G103510squalene epoxidasechr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G22530No description available.scaffold_6-View
PPE_001G42310No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G11450No description available.Chr02+View
PT07G00760No description available.Chr07+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G00510No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G077440Squalene monooxygenase (AHRD V1 ***- Q506K3_DATIN)%3B contains Interpro domain(s) IPR013698 Squalene epoxidasech04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G030380Squalene monooxygenase (AHRD V1 **** Q506K3_DATIN); contains Interpro domain(s) IPR013698 Squalene epoxidasechr04-View
ST02G011310Squalene monooxygenase (AHRD V1 **** Q506K3_DATIN); contains Interpro domain(s) IPR013698 Squalene epoxidasechr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G07450No description available.scaffold_1+View
TC0008G07990No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G01850similar to AT2G22830|SQE2 (squalene epoxidase 2)ch4-1-View
TP7G35410similar to AT4G37760|SQE3 (squalene epoxidase 3)ch7-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G05490name=GSVIVG01009287001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G25330LOC1002855589-View


Download

Gene id
Species
Description
Chromosome
Strand