Anchorpoints
- Gene id
- AT4G34870
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G16600 | rotamase CYP 3 (ROC3); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 16363 Blast hits to 16328 proteins in 2676 species: Archae - 108; Bacteria - 6734; Metazoa - 2930; Fungi - 1383; Plants - 1279; Viruses - 4; Other Eukaryotes - 3925 (source: NCBI BLink). Encodes cytosolic cyclophilin ROC3. rotamase CYP 3 | 2 | + | View |
AT4G38740 | rotamase CYP 1 Encodes cytosolic cyclophilin ROC1. rotamase CYP 1 (ROC1); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, response to cadmium ion, signal transduction; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 16514 Blast hits to 16480 proteins in 2670 species: Archae - 108; Bacteria - 6825; Metazoa - 2927; Fungi - 1383; Plants - 1289; Viruses - 4; Other Eukaryotes - 3978 (source: NCBI BLink). | 4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G00600 | No description available. | scaffold_7 | - | View |
AL7G06000 | No description available. | scaffold_7 | - | View |
AL3G37150 | No description available. | scaffold_3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G13580 | No description available. | A08 | - | View |
BR06G39700 | No description available. | A06 | + | View |
BR09G08690 | No description available. | A09 | + | View |
BR08G20270 | No description available. | A08 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G04430 | No description available. | Chr2 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00019G02830 | No description available. | CM3.5_scaffold00019 | - | View |
CM00045G00900 | No description available. | CM3.5_scaffold00045 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00037G01570 | No description available. | supercontig_37 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G00580 | No description available. | scaffold_7 | - | View |
CRU_007G05030 | No description available. | scaffold_7 | - | View |
CRU_003G29220 | No description available. | scaffold_3 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G13570 | No description available. | scaffold_6 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G00340 | No description available. | Chr02 | - | View |
GR02G19360 | No description available. | Chr02 | + | View |
GR12G15310 | No description available. | Chr12 | - | View |
GR08G03410 | No description available. | Chr08 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G042700 | No description available. | chr1 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02943G00290 | No description available. | scaffold02943 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G117750 | peptidyl-prolyl cis-trans isomerase | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G17870 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G13010 | No description available. | Chr09 | + | View |
PT04G16880 | No description available. | Chr04 | + | View |
PT05G24020 | No description available. | Chr05 | + | View |
PT02G02150 | No description available. | Chr02 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30131G03070 | No description available. | 30131 | + | View |
RC30170G05510 | No description available. | 30170 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G111170 | Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- Q9XF12_SOLTU)%3B contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type Peptidyl-prolyl cis-trans isomerase | ch01 | + | View |
SL10G054910 | Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- Q9XF12_SOLTU)%3B contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type | ch10 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G048580 | Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- Q9XF12_SOLTU); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G06690 | No description available. | scaffold_2 | - | View |
TC0002G06350 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G37060 | similar to AT4G38740|ROC1 (ROTAMASE CYP 1) | ch7-6 | + | View |
TP7G32640 | similar to AT4G34870|ROC5 (ROTAMASE CYCLOPHILIN 5) | ch7-5 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G10690 | name=GSVIVG01009919001; | chr18 | + | View |