Anchorpoints

Gene id
AT4G28890
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G04360RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G43420.1); Has 9268 Blast hits to 9239 proteins in 300 species: Archae - 0; Bacteria - 0; Metazoa - 2276; Fungi - 656; Plants - 4907; Viruses - 85; Other Eukaryotes - 1344 (source: NCBI BLink).1-View
AT2G20030RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28890.1); Has 9596 Blast hits to 9571 proteins in 288 species: Archae - 0; Bacteria - 6; Metazoa - 2467; Fungi - 781; Plants - 5028; Viruses - 54; Other Eukaryotes - 1260 (source: NCBI BLink). RING/U-box superfamily protein2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G12880No description available.scaffold_7+View
AL3G36010No description available.scaffold_3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G03420No description available.A10+View
BR08G16540No description available.A08+View
BR03G50580No description available.A03-View
BR01G08280No description available.A01+View
BR09G53560No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G05100No description available.Bvchr8.sca018-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G09170No description available.Chr6-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G33000No description available.scaffold_3+View
CRU_007G11080No description available.scaffold_7+View
CRU_001G03250No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00027G00260No description available.scaffold00027-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G29340No description available.scaffold_3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G34830No description available.Gm01+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G03260No description available.Chr11-View
GR10G07480No description available.Chr10-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G005330No description available.2-View
MD15G013590No description available.15-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09501G00610No description available.scaffold09501+View
ME00847G00690No description available.scaffold00847+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G087150RING-H2 finger protein ATL4Jchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G24350No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G23950No description available.Chr06+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G007320Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G09960No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G26870similar to AT4G28890|protein binding / ubiquitin-protein ligase/ zinc ion bindingch7-5-View
TP1G03170similar to AT1G04360|zinc finger (C3HC4-type RING finger) family proteinch1-1-View
TP3G33350similar to AT2G20030|zinc finger (C3HC4-type RING finger) family proteinch3-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G04720name=GSVIVG01015336001;chr11+View


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Gene id
Species
Description
Chromosome
Strand