Anchorpoints

Gene id
AT4G27260
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G54510Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Auxin-responsive GH3 family protein5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G19780No description available.scaffold_8-View
AL7G14750No description available.scaffold_7-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G17530No description available.A01+View
BR03G49580No description available.A03+View
BR02G15070No description available.A02+View
BR03G13080No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G16380No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00032G01080No description available.CM3.5_scaffold00032-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G14430No description available.scaffold_8-View
CRU_007G12820No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00012G01530No description available.scaffold00012+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G34480No description available.Gm12-View
GM13G36030No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G07950No description available.Chr02+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G018480No description available.3-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G081860indole-3-acetic acid-amido synthetasechr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G18820No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G41040No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G006610Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterch10-View
SL07G063850Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterch07+View
SL07G053030Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterch07+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G020810Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterchr07-View
ST06G015220Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterchr06+View
ST10G006790Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterchr10-View
ST12G012570Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoterchr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G16010No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G25180similar to AT4G27260|WES1ch7-4+View
TP6G16480similar to AT5G54510|DFL1 (DWARF IN LIGHT 1)ch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G04570name=GSVIVG01014545001;chr19+View


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Description
Chromosome
Strand