Anchorpoints
- Gene id
- AT4G27260
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G54510 | Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Auxin-responsive GH3 family protein | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G19780 | No description available. | scaffold_8 | - | View |
AL7G14750 | No description available. | scaffold_7 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G17530 | No description available. | A01 | + | View |
BR03G49580 | No description available. | A03 | + | View |
BR02G15070 | No description available. | A02 | + | View |
BR03G13080 | No description available. | A03 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G16380 | No description available. | Chr5 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00032G01080 | No description available. | CM3.5_scaffold00032 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G14430 | No description available. | scaffold_8 | - | View |
CRU_007G12820 | No description available. | scaffold_7 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00012G01530 | No description available. | scaffold00012 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM12G34480 | No description available. | Gm12 | - | View |
GM13G36030 | No description available. | Gm13 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G07950 | No description available. | Chr02 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G018480 | No description available. | 3 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G081860 | indole-3-acetic acid-amido synthetase | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G18820 | No description available. | scaffold_4 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G41040 | No description available. | Chr01 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL10G006610 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | ch10 | - | View |
SL07G063850 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **** B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | ch07 | + | View |
SL07G053030 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE)%3B contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | ch07 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G020810 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | chr07 | - | View |
ST06G015220 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | chr06 | + | View |
ST10G006790 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | chr10 | - | View |
ST12G012570 | Indole-3-acetic acid-amido synthetase GH3.8 (AHRD V1 **-* B6U4E2_MAIZE); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter | chr12 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G16010 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G25180 | similar to AT4G27260|WES1 | ch7-4 | + | View |
TP6G16480 | similar to AT5G54510|DFL1 (DWARF IN LIGHT 1) | ch6-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV19G04570 | name=GSVIVG01014545001; | chr19 | + | View |