Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT4G26400
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G56340 | RING/U-box superfamily protein ATCRT1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G15660 | No description available. | scaffold_7 | + | View |
| AL8G21820 | No description available. | scaffold_8 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G12200 | No description available. | A03 | - | View |
| BR06G00380 | No description available. | A06 | + | View |
| BR05G29530 | No description available. | A05 | - | View |
| BR08G00480 | No description available. | A08 | + | View |
| BR03G49090 | No description available. | A03 | - | View |
| BR10G09640 | No description available. | A10 | + | View |
| BR01G16750 | No description available. | A01 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL02G24450 | No description available. | Chr2 | - | View |
| CL11G16850 | No description available. | Chr11 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00003G07190 | No description available. | CM3.5_scaffold00003 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00119G00240 | No description available. | supercontig_119 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G13700 | No description available. | scaffold_7 | + | View |
| CRU_003G12270 | No description available. | scaffold_3 | + | View |
| CRU_008G16270 | No description available. | scaffold_8 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00123G00400 | No description available. | scaffold00123 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM08G03806 | No description available. | Gm08 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06582G01000 | No description available. | scaffold06582 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G01720 | No description available. | scaffold_6 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC28842G00210 | No description available. | 28842 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G11620 | similar to AT3G13430|zinc finger (C3HC4-type RING finger) family protein | ch3-1 | + | View |
| TP7G24300 | similar to AT4G26400|zinc finger (C3HC4-type RING finger) family protein | ch7-4 | - | View |
| TP1G41140 | similar to AT1G55530|zinc finger (C3HC4-type RING finger) family protein | ch1-2 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV06G07930 | name=GSVIVG01025505001; | chr6 | + | View |