Anchorpoints
- Gene id
- AT4G15910
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G02820 | Late embryogenesis abundant 3 (LEA3) family protein Late embryogenesis abundant 3 (LEA3) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development, response to stress; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 3 (InterPro:IPR004926); BEST Arabidopsis thaliana protein match is: senescence-associated gene 21 (TAIR:AT4G02380.1); Has 144 Blast hits to 139 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 1 | - | View |
AT4G02380 | Encodes AtLEA5 (late embryogenesis abundant like protein). Also known as SENESCENCE-ASSOCIATED GENE 21 (SAG21). Has a role on oxidative stress tolerance. mRNA levels are elevated in response to various stresses. senescence-associated gene 21 senescence-associated gene 21 (SAG21); CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 3 (InterPro:IPR004926); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant 3 (LEA3) family protein (TAIR:AT1G02820.1); Has 181 Blast hits to 176 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 181; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G02030 | No description available. | scaffold_1 | - | View |
AL7G27650 | No description available. | scaffold_7 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G00470 | No description available. | A09 | + | View |
BR01G20070 | No description available. | A01 | - | View |
BR08G07610 | No description available. | A08 | + | View |
BR10G05270 | No description available. | A10 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00016G01970 | No description available. | supercontig_16 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G33570 | No description available. | scaffold_6 | + | View |
CRU_001G01760 | No description available. | scaffold_1 | - | View |
CRU_007G24600 | No description available. | scaffold_7 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00016G00380 | No description available. | scaffold00016 | + | View |
CS00001G07420 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G09500 | No description available. | scaffold_8 | - | View |
EG0011G29610 | No description available. | scaffold_11 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G13490 | Late embryogenesis abundant protein Lea5 (putative) | LG4 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G02210 | No description available. | Gm10 | - | View |
GM15G15990 | No description available. | Gm15 | + | View |
GM09G04870 | No description available. | Gm09 | - | View |
GM17G03040 | No description available. | Gm17 | + | View |
GM03G37310 | No description available. | Gm03 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G19150 | No description available. | Chr11 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G071310 | No description available. | chr1 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G015400 | No description available. | 13 | - | View |
MD03G024650 | No description available. | 3 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04457G00620 | No description available. | scaffold04457 | - | View |
ME01945G00780 | No description available. | scaffold01945 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G120040 | late embryogenesis abundant protein | chr4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G12600 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT14G12770 | No description available. | Chr14 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29726G01740 | No description available. | 29726 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G075210 | Late embryogenesis abundant protein 5 (AHRD V1 ***- Q1HGG0_9ROSI)%3B contains Interpro domain(s) IPR004926 Late embryogenesis abundant protein 3 | ch09 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G022810 | Late embryogenesis abundant protein (AHRD V1 ***- E3W6T3_SESPO); contains Interpro domain(s) IPR004926 Late embryogenesis abundant protein 3 | chr09 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G30040 | No description available. | scaffold_1 | + | View |
TC0004G28840 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G14360 | similar to AT4G15910|ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) | ch7-4 | + | View |
TP1G01800 | similar to AT1G02820|late embryogenesis abundant 3 family protein / LEA3 family protein | ch1-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G08540 | name=GSVIVG01028033001; | chr7 | + | View |