Anchorpoints
- Gene id
- AT4G11310
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G23520 | Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 7771 Blast hits to 7697 proteins in 722 species: Archae - 59; Bacteria - 251; Metazoa - 3251; Fungi - 10; Plants - 1867; Viruses - 134; Other Eukaryotes - 2199 (source: NCBI BLink). Cysteine proteinases superfamily protein | 4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G34030 | No description available. | scaffold_6 | + | View |
AL7G18660 | No description available. | scaffold_7 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G13500 | No description available. | A01 | - | View |
BR02G27100 | No description available. | A02 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G29060 | No description available. | scaffold_6 | + | View |
CRU_007G16830 | No description available. | scaffold_7 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G056000 | Cathepsin B-like cysteine proteinase (AHRD V1 **-- CYSP_SCHMA)%3B contains Interpro domain(s) IPR013128 Peptidase C1A%2C papain | ch12 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G21420 | similar to AT4G23520|cysteine proteinase, putative | ch7-4 | - | View |
TP6G06120 | similar to AT4G11320|cysteine proteinase, putative | ch6-1 | - | View |