Anchorpoints

Gene id
AT4G02570
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G02980cullin 2 (CUL2); FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: cell cycle, ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex, chloroplast envelope; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G43140.1); Has 2240 Blast hits to 2201 proteins in 240 species: Archae - 0; Bacteria - 18; Metazoa - 947; Fungi - 508; Plants - 372; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). encodes an Arabidopsis cullin cullin 21+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G02260No description available.scaffold_1+View
AL6G38800No description available.scaffold_6-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G00320No description available.A09-View
BR03G27210No description available.A03-View
BR10G05140No description available.A10-View
BR09G54120No description available.A09+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G05030No description available.Chr6+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G01820No description available.supercontig_9-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G01950No description available.scaffold_1+View
CRU_006G33360No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G08140No description available.scaffold00001+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G36960No description available.Gm03-View
GM19G39610No description available.Gm19-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G12480No description available.Chr13-View
GR04G08800No description available.Chr04-View
GR02G02780No description available.Chr02-View
GR04G14140No description available.Chr04-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G027720No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01551G03460No description available.scaffold01551-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G437390cullin 3Bchr2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G05700cullin, putative, expressed5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G26790No description available.scaffold_8-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G074680Cullin 1B (AHRD V1 ***- Q711G7_TOBAC)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminalch09-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G022430Ubiquitin-protein ligase Cullin 4 (AHRD V1 **** D8RM97_SELML); contains Interpro domain(s) IPR001373 Cullin, N-terminalchr09+View
ST06G035020Ubiquitin-protein ligase Cullin 4 (AHRD V1 **** D8RM97_SELML); contains Interpro domain(s) IPR001373 Cullin, N-terminalchr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G28370No description available.scaffold_4-View
TC0001G29220No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G01970similar to AT1G02980|CUL2 (CULLIN 2)ch1-1+View
TP6G02480similar to AT4G02570|ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)ch6-1+View


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Gene id
Species
Description
Chromosome
Strand