Anchorpoints

Gene id
AT4G00430
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G01620plasma membrane intrinsic protein 1C a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1C (PIP1C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10781 Blast hits to 10762 proteins in 2222 species: Archae - 88; Bacteria - 5165; Metazoa - 1470; Fungi - 448; Plants - 2514; Viruses - 2; Other Eukaryotes - 1094 (source: NCBI BLink).1-View
AT2G45960a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1B (PIP1B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10384 Blast hits to 10346 proteins in 2170 species: Archae - 101; Bacteria - 5000; Metazoa - 1330; Fungi - 442; Plants - 2465; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). plasma membrane intrinsic protein 1B2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G33950No description available.scaffold_4+View
AL6G41210No description available.scaffold_6+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G28210No description available.A03+View
BR10G06290No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06490No description available.Bvchr1.sca001-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G06580No description available.CM3.5_scaffold00005+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00011G00150No description available.supercontig_11+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G27630No description available.scaffold_4+View
CRU_006G35590No description available.scaffold_6+View
CRU_001G00550No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01070No description available.scaffold00009+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G05460No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G03000Aquaporin PIP1-3 (AtPIP1) (putative)LG5+View
FV7G07910Aquaporin PIP1-3 (AtPIP1) (putative)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G37730No description available.Gm05-View
GM08G01860No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G16900No description available.Chr01-View
GR07G10000No description available.Chr07+View
GR04G21280No description available.Chr04+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G046000No description available.chr4+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G098375major intrinsic protein (MIP) family transporterchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G47220aquaporin protein, putative, expressed Probable aquaporin PIP1-24+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G16660No description available.scaffold_2+View
PPE_005G11040No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G12860No description available.Chr03+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G03970No description available.30190+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G081190Aquaporin 1 (AHRD V1 ***- O24662_TOBAC)%3B contains Interpro domain(s) IPR012269 Aquaporin Probable aquaporin PIP-type pTOM75ch08+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G029250Aquaporin 1 (AHRD V1 ***- O24662_TOBAC); contains Interpro domain(s) IPR012269 Aquaporinchr08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G35520No description available.scaffold_1-View
TC0003G27620No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G28030similar to AT2G45960|PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)ch4-6+View
TP6G00460similar to AT4G00430|PIP1ch6-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G06360name=GSVIVG01019743001;chr2-View


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Chromosome
Strand