Anchorpoints
- Gene id
- AT3G62410
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G47400 | CP12 domain-containing protein 1 CP12 domain-containing protein 1 (CP12-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: negative regulation of reductive pentose-phosphate cycle; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: CP12 domain-containing protein 2 (TAIR:AT3G62410.1); Has 264 Blast hits to 264 proteins in 70 species: Archae - 0; Bacteria - 128; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. | 2 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G35600 | No description available. | scaffold_4 | + | View |
AL5G33530 | No description available. | scaffold_5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G17400 | No description available. | A07 | + | View |
BR05G00510 | No description available. | A05 | - | View |
BR03G22990 | No description available. | A03 | + | View |
BR09G41440 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G15030 | No description available. | Bvchr5.sca025 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G09650 | No description available. | Chr10 | - | View |
CL09G04770 | No description available. | Chr9 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00026G02470 | No description available. | CM3.5_scaffold00026 | + | View |
CM00031G03930 | No description available. | CM3.5_scaffold00031 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00018G00400 | No description available. | supercontig_18 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G27690 | No description available. | scaffold_5 | + | View |
CRU_004G29000 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G06610 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G30070 | No description available. | scaffold_11 | - | View |
EG0008G08750 | No description available. | scaffold_8 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G34700 | Calvin cycle protein CP12 (similar to) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G40400 | No description available. | Gm19 | - | View |
GM10G01610 | No description available. | Gm10 | + | View |
GM02G01580 | No description available. | Gm02 | + | View |
GM03G37800 | No description available. | Gm03 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G13940 | No description available. | Chr08 | + | View |
GR01G14430 | No description available. | Chr01 | - | View |
GR07G12270 | No description available. | Chr07 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07301G00350 | No description available. | scaffold07301 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G109520 | calvin cycle protein CP12-1 | chr7 | - | View |
MT1G087030 | calvin cycle protein CP12-1 | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G19380 | calvin cycle protein CP12, putative, expressed | 3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G27910 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G19610 | No description available. | Chr02 | + | View |
PT14G12070 | No description available. | Chr14 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30076G02190 | No description available. | 30076 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G009630 | CP12 (AHRD V1 ***- O24136_TOBAC)%3B contains Interpro domain(s) IPR003823 Protein of unknown function CP12 | ch06 | + | View |
SL01G079470 | CP12 (AHRD V1 ***- O24136_TOBAC)%3B contains Interpro domain(s) IPR003823 Protein of unknown function CP12 | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G007930 | CP12 (AHRD V1 ***- O24136_TOBAC); contains Interpro domain(s) IPR003823 Protein of unknown function CP12 | chr06 | + | View |
ST01G023740 | CP12 (AHRD V1 ***- O24136_TOBAC); contains Interpro domain(s) IPR003823 Protein of unknown function CP12 | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G31160 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G29340 | similar to AT2G47400|CP12-1 | ch4-6 | + | View |
TP5G01000 | similar to AT3G62410|CP12-2 | ch5-1 | - | View |