Anchorpoints

Gene id
AT3G58620
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G42580tetratricopetide-repeat thioredoxin-like 3 Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. tetratricopetide-repeat thioredoxin-like 3 (TTL3); FUNCTIONS IN: binding; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin mediated signaling pathway, leaf vascular tissue pattern formation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 4 (TAIR:AT3G58620.1); Has 21212 Blast hits to 11305 proteins in 1032 species: Archae - 491; Bacteria - 3820; Metazoa - 5890; Fungi - 2224; Plants - 2157; Viruses - 6; Other Eukaryotes - 6624 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G29200No description available.scaffold_5+View
AL4G29960No description available.scaffold_4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G03000No description available.A05+View
BR09G38730No description available.A09+View
BR03G21150No description available.A03+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00209G00360No description available.supercontig_209+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G24130No description available.scaffold_4+View
CRU_005G24030No description available.scaffold_5+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G09380No description available.scaffold_11+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G33770No description available.Gm12+View
GM13G36720No description available.Gm13-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G14540No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G24720similar to AT2G42580|TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3)ch4-6+View
TP5G04250similar to AT3G58620|TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G02800name=GSVIVG01020699001;chr12-View


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Gene id
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Description
Chromosome
Strand