Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT3G55330
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G39470 | PsbP-like protein 2 PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 344 Blast hits to 344 proteins in 81 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). | 2 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL4G25950 | No description available. | scaffold_4 | + | View |
| AL5G25440 | No description available. | scaffold_5 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR05G06260 | No description available. | A05 | - | View |
| BR04G04090 | No description available. | A04 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00079G00330 | No description available. | CM3.5_scaffold00079 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00001G03320 | No description available. | supercontig_1 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_004G20840 | No description available. | scaffold_4 | + | View |
| CRU_005G20670 | No description available. | scaffold_5 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00024G01010 | No description available. | scaffold00024 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G23000 | No description available. | scaffold_7 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV7G27500 | PsbP-like protein 2, chloroplastic, Precursor (similar to) | LG7 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM10G43690 | No description available. | Gm10 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR12G06910 | No description available. | Chr12 | - | View |
| GR09G31770 | No description available. | Chr09 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD01G011310 | No description available. | 1 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME08265G01560 | No description available. | scaffold08265 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G115410 | photosystem II reaction center PsbP family protein | chr1 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G17174 | PsbP, putative, expressed | 3 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_002G22100 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G21000 | No description available. | Chr10 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0010G04970 | No description available. | scaffold_10r | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP4G21770 | similar to AT2G39480|PGP6 (P-GLYCOPROTEIN 6) | ch4-6 | + | View |
| TP5G07140 | similar to AT3G55330|PPL1 (PsbP-like protein 1) | ch5-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G05850 | name=GSVIVG01016618001; | chr13 | - | View |