Anchorpoints

Gene id
AT3G52340
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G35840Sucrose-6F-phosphate phosphohydrolase family protein Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: response to cadmium ion, sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1); Has 1523 Blast hits to 1517 proteins in 541 species: Archae - 0; Bacteria - 1269; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).2+View
AT1G51420sucrose-phosphatase 1 sucrose-phosphatase 1 (SPP1); FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process, metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: petal, leaf whorl, root, flower, cultured cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: Sucrose-6F-phosphate phosphohydrolase family protein (TAIR:AT2G35840.3); Has 854 Blast hits to 850 proteins in 328 species: Archae - 0; Bacteria - 616; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G22130No description available.scaffold_5+View
AL4G21270No description available.scaffold_4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G21310No description available.A04+View
BR04G05850No description available.A04-View
BR03G17650No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G16070No description available.Chr10+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G17550No description available.scaffold_5+View
CRU_004G17020No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G18100similar to AT2G35840|sucrose-phosphatase 1 (SPP1)ch4-6+View
TP5G09940similar to AT3G52340|SPP2 (SUCROSE-6F-PHOSPHATE PHOSPHOHYDROLASE 2)ch5-1-View


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