Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT3G47990
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G62840 | Phosphoglycerate mutase family protein Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 111 Blast hits to 111 proteins in 37 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL5G16790 | No description available. | scaffold_5 | - | View |
| AL8G29350 | No description available. | scaffold_8 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR01G22930 | No description available. | A01 | - | View |
| BR06G17340 | No description available. | A06 | + | View |
| BR06G29380 | No description available. | A06 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV5G02800 | No description available. | Bvchr5.sca023 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL06G17510 | No description available. | Chr6 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00030G00190 | No description available. | CM3.5_scaffold00030 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_008G22910 | No description available. | scaffold_8 | - | View |
| CRU_005G13210 | No description available. | scaffold_5 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM05G02121 | No description available. | Gm05 | + | View |
| GM06G19473 | No description available. | Gm06 | - | View |
| GM17G09790 | No description available. | Gm17 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME04083G00150 | No description available. | scaffold04083 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_005G18080 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT15G07470 | No description available. | Chr15 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G071420 | Ring finger protein 12 (AHRD V1 *-*- Q4V889_RAT)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch06 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST03G027650 | Phosphoglycerate mutase family protein (AHRD V1 ***- B6TTB7_MAIZE); contains Interpro domain(s) IPR013078 Phosphoglycerate mutase | chr03 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G25980 | similar to AT3G47990|zinc finger (C3HC4-type RING finger) family protein | ch2-4 | - | View |
| TP5G13990 | similar to AT3G47990|zinc finger (C3HC4-type RING finger) family protein | ch5-1 | + | View |