Anchorpoints
- Gene id
- AT3G29270
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G69330 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2); Has 288 Blast hits to 287 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). RING/U-box superfamily protein | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G08880 | No description available. | scaffold_5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G26120 | No description available. | A07 | - | View |
BR02G31670 | No description available. | A02 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G22410 | No description available. | Chr9 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00001G00960 | No description available. | supercontig_1 | + | View |
CP00014G01430 | No description available. | supercontig_14 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G07390 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00015G02190 | No description available. | scaffold00015 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G26090 | No description available. | scaffold_2 | - | View |
EG0009G16660 | No description available. | scaffold_9 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G04570 | RING finger protein 208 (probable) | scf0513158 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G05870 | No description available. | Gm13 | + | View |
GM19G03380 | No description available. | Gm19 | + | View |
GM18G49900 | No description available. | Gm18 | + | View |
GM08G26380 | No description available. | Gm08 | + | View |
GM02G12720 | No description available. | Gm02 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR12G05040 | No description available. | Chr12 | - | View |
GR07G08120 | No description available. | Chr07 | + | View |
GR06G01230 | No description available. | Chr06 | - | View |
GR13G09160 | No description available. | Chr13 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ2G017450 | No description available. | chr2 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G004210 | No description available. | 13 | - | View |
MD16G003210 | No description available. | 16 | - | View |
MD09G004370 | No description available. | 9 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08359G01900 | No description available. | scaffold08359 | - | View |
ME06609G00500 | No description available. | scaffold06609 | - | View |
ME11341G01170 | No description available. | scaffold11341 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G23860 | No description available. | scaffold_3 | - | View |
PPE_001G29410 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G16110 | No description available. | Chr10 | - | View |
PT17G09000 | No description available. | Chr17 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29630G00020 | No description available. | 29630 | + | View |
RC30138G01910 | No description available. | 30138 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G012560 | RING zinc finger protein-like (AHRD V1 **-- Q9LHJ7_ARATH)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch05 | - | View |
SL02G088570 | RING zinc finger protein-like (AHRD V1 ***- Q9LHJ7_ARATH)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G034310 | RING zinc finger protein-like (AHRD V1 ***- B6U8G9_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-type | chr02 | - | View |
ST05G005490 | RING zinc finger protein-like (AHRD V1 **-- B6U8G9_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-type | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G09480 | No description available. | scaffold_4 | + | View |
TC0002G33410 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G17850 | similar to AT3G29270|ubiquitin-protein ligase | ch2-4 | + | View |
TP5G24390 | similar to AT1G69330|zinc finger (C3HC4-type RING finger) family protein | ch5-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G03120 | name=GSVIVG01007932001; | chr17 | + | View |
VV14G02800 | name=GSVIVG01011489001; | chr14 | + | View |