Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT3G25050
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G13080 | xyloglucan endotransglucosylase/hydrolase 1 xyloglucan endotransglucosylase/hydrolase 1 (XTH1); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 2 (TAIR:AT4G13090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G28630 | No description available. | scaffold_3 | + | View |
| AL0G03620 | No description available. | scaffold_9 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR07G03680 | No description available. | A07 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV7G14960 | No description available. | Bvchr7.sca019 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00008G01290 | No description available. | supercontig_8 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G24360 | No description available. | scaffold_3 | + | View |
| CRU_007G28410 | No description available. | scaffold_7 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00029G00730 | No description available. | scaffold00029 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0008G06720 | No description available. | scaffold_8 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G14620 | Xyloglucan endotransglucosylase/hydrolase protein 2 (At-XTH2), Precursor (probable) | LG2 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM08G46450 | No description available. | Gm08 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR07G15570 | No description available. | Chr07 | + | View |
| GR04G22640 | No description available. | Chr04 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD09G013730 | No description available. | 9 | + | View |
| MD05G015810 | No description available. | 5 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11661G00180 | No description available. | scaffold11661 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT8G013055 | xyloglucan endotransglucosylase/hydrolase family protein | chr8 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_008G21620 | No description available. | scaffold_8 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT02G24420 | No description available. | Chr02 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29904G00380 | No description available. | 29904 | - | View |
| RC30204G00100 | No description available. | 30204 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST06G033820 | Xyloglucan endotransglucosylase/hydrolase (AHRD V1 **** D7URZ1_DIACA); contains Interpro domain(s) IPR000757 Glycoside hydrolase, family 16 | chr06 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0001G21810 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G10440 | similar to AT4G13090|xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | ch7-4 | - | View |
| TP3G22650 | similar to AT3G25050|XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3) | ch3-2 | + | View |