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WorkbenchAnchorpoints
- Gene id
- AT3G23210
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G14410 | basic Helix-Loop-Helix 104 (bHLH104); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G23210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G25820 | No description available. | scaffold_3 | - | View |
| AL7G29920 | No description available. | scaffold_7 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR01G28060 | No description available. | A01 | + | View |
| BR07G05370 | No description available. | A07 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV3G09690 | No description available. | Bvchr3.sca001 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00006G05360 | No description available. | CM3.5_scaffold00006 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00044G00730 | No description available. | supercontig_44 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G22470 | No description available. | scaffold_3 | - | View |
| CRU_007G26630 | No description available. | scaffold_7 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00088G00490 | No description available. | scaffold00088 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0008G01620 | No description available. | scaffold_8 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV4G00080 | Transcription factor bHLH104 (bHLH 104) (similar to) | LG4 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM20G22010 | No description available. | Gm20 | - | View |
| GM10G01010 | No description available. | Gm10 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD13G022930 | No description available. | 13 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME01551G01100 | No description available. | scaffold01551 | + | View |
| ME10563G01090 | No description available. | scaffold10563 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G043430 | BHLH domain class transcription factor | chr1 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G03660 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G07290 | No description available. | Chr10 | + | View |
| PT08G16570 | No description available. | Chr08 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29603G00050 | No description available. | 29603 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G089870 | Transcription factor (AHRD V1 **** D6MKE6_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch09 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST09G026070 | Transcription factor (AHRD V1 **** D6MKE6_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | chr09 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0004G25560 | No description available. | scaffold_4 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G20860 | similar to AT3G23210|basic helix-loop-helix (bHLH) family protein | ch3-1 | - | View |
| TP7G12480 | similar to AT4G14410|basic helix-loop-helix (bHLH) family protein | ch7-4 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV05G07880 | name=GSVIVG01027766001; | chr5 | - | View |