Anchorpoints

Gene id
AT3G19350
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G49760poly(A) binding protein 8 polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. poly(A) binding protein 8 (PAB8); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 986469 Blast hits to 485112 proteins in 21501 species: Archae - 20784; Bacteria - 581960; Metazoa - 196391; Fungi - 29721; Plants - 62748; Viruses - 68352; Other Eukaryotes - 26513 (source: NCBI BLink).1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G44100No description available.scaffold_1+View
AL3G20880No description available.scaffold_3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G03520No description available.A06+View
BR03G35890No description available.A03+View
BR01G30590No description available.A01-View
BR05G24280No description available.A05-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G06200No description available.Chr2-View
CL05G11410No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00034G00670No description available.CM3.5_scaffold00034-View
CM00038G01630No description available.CM3.5_scaffold00038-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G01130No description available.supercontig_55+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G08860No description available.scaffold_9+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G04460No description available.Gm06-View
GM14G09300No description available.Gm14+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G21410No description available.Chr09-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G002620No description available.15+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G102040polyadenylate-binding proteinchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G14860No description available.scaffold_8-View
PPE_001G43730No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G02540No description available.Chr14+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29801G00960No description available.29801-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G107870Poly(A) RNA binding protein (AHRD V1 **** B2CJ74_9HYPO)%3B contains Interpro domain(s) IPR006515 Polyadenylate binding protein%2C human types 1%2C 2%2C 3%2C 4ch01+View
SL12G088720Polyadenylate-binding protein 2 (AHRD V1 ***- B6U4M0_MAIZE)%3B contains Interpro domain(s) IPR006515 Polyadenylate binding protein%2C human types 1%2C 2%2C 3%2C 4ch12+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G045020Poly(A) RNA binding protein (AHRD V1 **** B2CJ74_9HYPO); contains Interpro domain(s) IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4chr01+View
ST12G026870Poly(A) RNA binding protein (AHRD V1 **** B2CJ74_9HYPO); contains Interpro domain(s) IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4chr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G00340No description available.scaffold_8+View
TC0002G09990No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G36650similar to AT1G49760|PAB8 (POLY(A) BINDING PROTEIN 8)ch1-2+View
TP3G17410similar to AT1G49760|PAB8 (POLY(A) BINDING PROTEIN 8)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G05120name=GSVIVG01022079001;chr7+View
VV03G06400name=GSVIVG01031709001;chr3+View


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Description
Chromosome
Strand