Anchorpoints

Gene id
AT3G13750
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G56870beta-galactosidase 4 beta-galactosidase 4 (BGAL4); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 12 (TAIR:AT4G26140.1); Has 2215 Blast hits to 2058 proteins in 473 species: Archae - 15; Bacteria - 949; Metazoa - 388; Fungi - 211; Plants - 584; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).5+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G14350No description available.scaffold_3+View
AL8G22480No description available.scaffold_8+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G34510No description available.A01-View
BR05G29200No description available.A05-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00018G02910No description available.CM3.5_scaffold00018+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00025G00590No description available.supercontig_25-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G12680No description available.scaffold_3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G26370No description available.scaffold_6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G02750No description available.Gm15+View
GM08G20650No description available.Gm08-View
GM07G01250No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G14080No description available.Chr09+View
GR03G05950No description available.Chr03-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G037780No description available.chr3-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12525G00650No description available.scaffold12525+View
ME10493G01060No description available.scaffold10493-View
ME05875G00570No description available.scaffold05875+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G016230beta-galactosidasechr8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G23010No description available.scaffold_7-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G03700No description available.Chr03+View
PT01G20040No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G044880Beta-galactosidase Beta-galactosidase (AHRD V1 ***- Q546T5_SOLLC)%3B contains Interpro domain(s) IPR001944 Glycoside hydrolase%2C family 35ch12+View
SL06G062580Beta-galactosidase (AHRD V1 ***- B2LYJ3_PETHY)%3B contains Interpro domain(s) IPR001944 Glycoside hydrolase%2C family 35ch06+View
SL03G121540Beta-galactosidase (AHRD V1 ***- Q9ZP11_SOLLC)%3B contains Interpro domain(s) IPR019801 Glycoside hydrolase%2C family 35%2C conserved site IPR001944 Glycoside hydrolase%2C family 35 IPR000922 D-galactoside/L-rhamnose binding SUEL lectinch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G035400Beta-galactosidase (AHRD V1 ***- Q9ZP11_SOLLC); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr03-View
ST12G022740Beta-galactosidase (AHRD V1 ***- Q546T5_SOLLC); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr12+View
ST06G021660Beta-galactosidase (AHRD V1 **** B2LYJ3_PETHY); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G11090No description available.scaffold_6+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G11950similar to AT3G13750|BGAL1 (Beta galactosidase 1)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G03150name=GSVIVG01016849001;chr9+View


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Gene id
Species
Description
Chromosome
Strand