Anchorpoints

Gene id
AT3G11410
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G72770HYPERSENSITIVE TO ABA1 homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1); Has 6788 Blast hits to 6778 proteins in 499 species: Archae - 4; Bacteria - 382; Metazoa - 1655; Fungi - 745; Plants - 2728; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.1+View
AT1G17550Protein Phosphatase 2C homology to ABI2 (HAB2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI1 (TAIR:AT1G72770.3); Has 6552 Blast hits to 6537 proteins in 424 species: Archae - 4; Bacteria - 229; Metazoa - 1602; Fungi - 744; Plants - 2705; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). homology to ABI21+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G11810No description available.scaffold_3-View
AL2G21570No description available.scaffold_2+View
AL1G18480No description available.scaffold_1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G31210No description available.A05+View
BR06G12520No description available.A06+View
BR07G28840No description available.A07+View
BR10G17420No description available.A10+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G02680No description available.supercontig_19-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G10250No description available.scaffold_3-View
CRU_001G16530No description available.scaffold_1+View
CRU_002G18520No description available.scaffold_2+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G23490No description available.scaffold_7+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08910G00220No description available.scaffold08910-View
ME03150G00900No description available.scaffold03150-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G052980Protein phosphatase 2C (AHRD V1 ***- Q8RVG0_TOBAC)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2Cch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G021270Protein phosphatase 2C (AHRD V1 **** Q8RVG0_TOBAC); contains Interpro domain(s) IPR015655 Protein phosphatase 2Cchr03-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G09640similar to AT3G11410|PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)ch3-1-View
TP5G27830similar to AT1G72770|HAB1 (HOMOLOGY TO ABI1)ch5-6+View
TP1G15690similar to AT1G17550|HAB2ch1-1+View
TP6G20770similar to AT5G59220|protein phosphatase 2C, putative / PP2C, putativech6-6+View


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Gene id
Species
Description
Chromosome
Strand