Anchorpoints

Gene id
AT3G09810
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G03290isocitrate dehydrogenase V (IDH-V); FUNCTIONS IN: isocitrate dehydrogenase (NAD+) activity, zinc ion binding, ATP binding; INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI (TAIR:AT3G09810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. isocitrate dehydrogenase V5+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G02420No description available.scaffold_6+View
AL3G10020No description available.scaffold_3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G00800No description available.A03-View
BR10G28020No description available.A10-View
BR02G03240No description available.A02+View
BR05G32470No description available.A05-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00092G01170No description available.supercontig_92-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G08520No description available.scaffold_3+View
CRU_006G02090No description available.scaffold_6+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G16590No description available.Chr06-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11069G00100No description available.scaffold11069+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G24410No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G09120No description available.Chr16+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G08140similar to AT3G09810|isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativech3-1+View
TP6G39450similar to AT5G03290|isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativech6-6-View


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Gene id
Species
Description
Chromosome
Strand