Anchorpoints
- Gene id
- AT3G02380
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G15840 | Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1. B-box type zinc finger protein with CCT domain CONSTANS (CO); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 2 (TAIR:AT3G02380.1); Has 3403 Blast hits to 2554 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 2; Plants - 3122; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G01500 | No description available. | scaffold_3 | - | View |
AL6G15680 | No description available. | scaffold_6 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G07680 | No description available. | A02 | - | View |
BR03G28890 | No description available. | A03 | - | View |
BR01G34930 | No description available. | A01 | - | View |
BR10G19340 | No description available. | A10 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G13660 | No description available. | scaffold_6 | - | View |
CRU_003G01400 | No description available. | scaffold_3 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G17640 | No description available. | scaffold_9 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G41490 | Zinc finger protein CONSTANS-LIKE 2 (similar to) | LG6 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM18G51320 | No description available. | Gm18 | - | View |
GM13G07030 | No description available. | Gm13 | - | View |
GM08G28370 | No description available. | Gm08 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G10460 | No description available. | Chr03 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD17G005920 | No description available. | 17 | - | View |
MD09G005600 | No description available. | 9 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04043G01430 | No description available. | scaffold04043 | + | View |
ME06871G01030 | No description available. | scaffold06871 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G22420 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G10750 | No description available. | Chr17 | - | View |
PT04G10830 | No description available. | Chr04 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G089500 | Tomato CONSTANS-like 2 | ch02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G033400 | CONSTANS (Fragment) (AHRD V1 ***- A6YCH7_SOLTU); contains Interpro domain(s) IPR010402 CCT domain | chr02 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G01430 | similar to AT3G02380|COL2 (constans-like 2) | ch3-1 | - | View |
TP6G28260 | similar to AT5G15850|COL1 (constans-like 1) | ch6-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G15750 | name=GSVIVG01036499001; | chr14 | + | View |