Anchorpoints
- Gene id
- AT2G45140
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G60600 | vesicle associated protein (VAP); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 1108 Blast hits to 1074 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 446; Fungi - 141; Plants - 434; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2. vesicle associated protein | 3 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G31330 | No description available. | scaffold_5 | + | View |
AL4G33000 | No description available. | scaffold_4 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G40130 | No description available. | A09 | + | View |
BR04G26910 | No description available. | A04 | + | View |
BR04G01360 | No description available. | A04 | - | View |
BR07G16640 | No description available. | A07 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G65030 | No description available. | Bvchr1_un.sca002 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00049G01470 | No description available. | supercontig_49 | + | View |
CP00029G01460 | No description available. | supercontig_29 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G25950 | No description available. | scaffold_5 | + | View |
CRU_004G26780 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G01320 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G20550 | No description available. | scaffold_4 | + | View |
EG0005G03890 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G11870 | Vesicle-associated membrane protein-associated protein C16G5.05c (VAMP-associated protein C16G5.05c) (probable) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G15010 | No description available. | Gm17 | - | View |
GM11G03480 | No description available. | Gm11 | - | View |
GM03G03800 | No description available. | Gm03 | - | View |
GM01G41901 | No description available. | Gm01 | + | View |
GM01G33220 | No description available. | Gm01 | + | View |
GM05G04580 | No description available. | Gm05 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G10620 | No description available. | Chr08 | - | View |
GR03G17080 | No description available. | Chr03 | - | View |
GR04G16380 | No description available. | Chr04 | - | View |
GR04G04010 | No description available. | Chr04 | + | View |
GR07G08900 | No description available. | Chr07 | + | View |
GR08G23570 | No description available. | Chr08 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11581G00390 | No description available. | scaffold11581 | - | View |
ME08265G04940 | No description available. | scaffold08265 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G026540 | MSP (major sperm protein) domain protein | chr4 | - | View |
MT5G012420 | VAMP-associated protein | chr5 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G44300 | MSP domain containing protein, expressed | 2 | + | View |
OS04G46780 | MSP domain containing protein, expressed | 4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G13570 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT14G05950 | No description available. | Chr14 | + | View |
PT02G14400 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G00800 | No description available. | 30174 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G078690 | Vesicle-associated membrane protein-associated protein (AHRD V1 **-- Q1ANA7_WHEAT)%3B contains Interpro domain(s) IPR016763 Vesicle-associated membrane protein | ch08 | + | View |
SL01G090910 | Vesicle-associated membrane protein-associated protein A (AHRD V1 ***- B6UGD8_MAIZE)%3B contains Interpro domain(s) IPR016763 Vesicle-associated membrane protein | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G030060 | Vesicle-associated membrane protein-associated protein A (AHRD V1 ***- B6UGD8_MAIZE); contains Interpro domain(s) IPR016763 Vesicle-associated membrane protein | chr01 | + | View |
ST08G024490 | Vesicle-associated membrane protein-associated protein (AHRD V1 ***- Q1ANA7_WHEAT); contains Interpro domain(s) IPR016763 Vesicle-associated membrane protein | chr08 | + | View |
ST08G005340 | Vesicle-associated membrane protein-associated protein (AHRD V1 *-*- Q1ANA7_WHEAT); contains Interpro domain(s) IPR008962 PapD-like | chr08 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G37680 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G02630 | similar to AT3G60600|VAP (VESICLE ASSOCIATED PROTEIN) | ch5-1 | - | View |
TP4G27200 | similar to AT2G45140|PVA12 (PLANT VAP HOMOLOG 12) | ch4-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV15G09430 | name=GSVIVG01027683001; | chr15 | + | View |
VV02G00450 | name=GSVIVG01001317001; | chr2 | - | View |