Anchorpoints
- Gene id
- AT2G45110
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G60570 | expansin B5 (EXPB5); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 1985 Blast hits to 1982 proteins in 144 species: Archae - 0; Bacteria - 10; Metazoa - 1; Fungi - 27; Plants - 1928; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). expansin B5 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) | 3 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G32950 | No description available. | scaffold_4 | + | View |
AL5G31280 | No description available. | scaffold_5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G01390 | No description available. | A04 | - | View |
BR07G16620 | No description available. | A07 | + | View |
BR05G04790 | No description available. | A05 | + | View |
BR03G22180 | No description available. | A03 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G64940 | No description available. | Bvchr1_un.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G00350 | No description available. | Chr5 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G00380 | No description available. | CM3.5_scaffold00006 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00049G01380 | No description available. | supercontig_49 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G26710 | No description available. | scaffold_4 | + | View |
CRU_005G25900 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G01240 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G13240 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G12150 | Expansin-B18, Precursor (similar to) | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM03G03980 | No description available. | Gm03 | - | View |
GM11G17160 | No description available. | Gm11 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G10670 | No description available. | Chr08 | - | View |
GR04G16420 | No description available. | Chr04 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04450G00210 | No description available. | scaffold04450 | - | View |
ME08265G04870 | No description available. | scaffold08265 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS04G46630 | expansin precursor, putative, expressed Expansin-B15 | 4 | + | View |
OS02G44106 | expansin precursor, putative, expressed Putative expansin-B14 | 2 | + | View |
OS10G40700 | Expansin-B6 expansin precursor, putative, expressed | 10 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G13390 | No description available. | scaffold_2 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G00720 | No description available. | 30174 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G090810 | Expansin protein (AHRD V1 ***- Q14F61_WHEAT)%3B contains Interpro domain(s) IPR007112 Expansin 45%2C endoglucanase-like | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G029960 | Expansin protein (AHRD V1 ***- Q14F61_WHEAT); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G38050 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G02660 | similar to AT3G60570|ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5) | ch5-1 | - | View |
TP4G27160 | similar to AT2G45110|ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4) | ch4-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV15G00420 | name=GSVIVG01018168001; | chr15 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G18160 | LOC542496 | 9 | - | View |
ZM01G21220 | Beta-expansin 1aPutative uncharacterized protein ; | 1 | - | View |
ZM04G20490 | No description available. | 4 | + | View |