Anchorpoints

Gene id
AT2G37950
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G01070RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 886 Blast hits to 882 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 307; Fungi - 14; Plants - 509; Viruses - 15; Other Eukaryotes - 41 (source: NCBI BLink).5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G24110No description available.scaffold_4-View
AL6G01090No description available.scaffold_6+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00029G02440No description available.scaffold00029-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G04960No description available.A04+View
BR05G07350No description available.A05+View
BR10G11830No description available.A10+View
BR03G00410No description available.A03+View
BR03G10690No description available.A03-View
BR03G18780No description available.A03-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G07370No description available.Chr4+View
CL03G01060No description available.Chr3+View
CL10G19610No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00044G01190No description available.CM3.5_scaffold00044+View
CM00011G01260No description available.CM3.5_scaffold00011+View
CM00008G02100No description available.CM3.5_scaffold00008-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00056G00620No description available.supercontig_56-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G19300No description available.scaffold_4-View
CRU_006G00770No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00083G00400No description available.scaffold00083-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G25370No description available.scaffold_11+View
EG0002G22430No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G11660F-box/kelch-repeat protein At3g06240 (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G15820No description available.Gm03+View
GM07G17130No description available.Gm07-View
GM02G42020No description available.Gm02-View
GM14G06880No description available.Gm14+View
GM11G34750No description available.Gm11-View
GM18G41833No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G02050No description available.Chr13+View
GR06G17960No description available.Chr06-View
GR12G10940No description available.Chr12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD04G011420No description available.4-View
MD12G016470No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03150G00660No description available.scaffold03150+View
ME03651G00340No description available.scaffold03651+View
ME06512G02860No description available.scaffold06512+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G069730RING/FYVE/PHD zinc finger proteinchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G23470No description available.scaffold_2-View
PPE_006G01000No description available.scaffold_6+View
PPE_006G27450No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G19510No description available.Chr10+View
PT16G10590No description available.Chr16-View
PT06G09400No description available.Chr06-View
PT08G06260No description available.Chr08-View
PT09G03970No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29751G00300No description available.29751+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G086700Zinc finger family protein (Fragment) (AHRD V1 *-*- D7M766_ARALY)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech10-View
SL09G011770Zinc finger family protein (Fragment) (AHRD V1 *-*- D7M766_ARALY)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech09-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G012160Zinc finger family protein (Fragment) (AHRD V1 *--- D7M766_ARALY); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-typechr09+View
ST10G027810Zinc finger family protein (Fragment) (AHRD V1 *-*- D7M766_ARALY); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-typechr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G02510No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G40460similar to AT5G01070|zinc finger (C3HC4-type RING finger) family proteinch6-6-View
TP4G20260similar to AT2G37950|zinc finger (C3HC4-type RING finger) family proteinch4-6-View
TP6G20700similar to AT5G59000|zinc finger (C3HC4-type RING finger) family proteinch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G02500name=GSVIVG01024828001;chr6-View
VV08G13590name=GSVIVG01034042001;chr8-View
VV13G04080name=GSVIVG01016394001;chr13-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G26850No description available.3+View


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Gene id
Species
Description
Chromosome
Strand