Anchorpoints

Gene id
AT2G22430
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G40060homeobox protein 16 homeobox protein 16 (HB16); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 6 (TAIR:AT2G22430.1); Has 9713 Blast hits to 9689 proteins in 534 species: Archae - 2; Bacteria - 4; Metazoa - 7673; Fungi - 210; Plants - 1646; Viruses - 5; Other Eukaryotes - 173 (source: NCBI BLink). Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.4-View
AT5G65310Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. homeobox protein 5 homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G02330No description available.scaffold_7+View
AL8G32130No description available.scaffold_8-View
AL4G01890No description available.scaffold_4-View
AL4G02240No description available.scaffold_4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G00940No description available.A01-View
BR02G41050No description available.A02-View
BR03G56130No description available.A03+View
BR04G12540No description available.A04-View
BR09G09670No description available.A09+View
BR06G23230No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G05200No description available.Bvchr6.sca005-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G18850No description available.Chr1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00670No description available.supercontig_55+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G01510No description available.scaffold_4-View
CRU_008G25410No description available.scaffold_8-View
CRU_004G01840No description available.scaffold_4-View
CRU_007G01930No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00059G00640No description available.scaffold00059+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G03270No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G01830No description available.Gm18+View
GM08G14130No description available.Gm08+View
GM11G37920No description available.Gm11+View
GM05G30940No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G11150No description available.Chr11+View
GR08G09110No description available.Chr08-View
GR07G23520No description available.Chr07-View
GR03G04150No description available.Chr03-View
GR10G03780No description available.Chr10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08265G01310No description available.scaffold08265-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G086790homeobox associated leucine zipper proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G20020No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G09710No description available.Chr07-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G051460Homeobox-leucine zipper protein (AHRD V1 ***- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associatedch05+View
SL11G010270Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR001356 Homeoboxch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G009430Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL); contains Interpro domain(s) IPR001356 Homeoboxchr11+View
ST05G023910Homeobox-leucine zipper protein (AHRD V1 ***- Q9FXN8_ZINEL); contains Interpro domain(s) IPR003106 Leucine zipper, homeobox-associatedchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G09170No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G28420similar to AT5G65310|ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)ch2-4-View
TP4G01450similar to AT2G22430|ATHB6ch4-1-View
TP7G35790similar to AT4G40060|ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)ch7-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G02740name=GSVIVG01003431001;chr7-View
VV18G03960name=GSVIVG01009083001;chr18-View


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Gene id
Species
Description
Chromosome
Strand