Anchorpoints
- Gene id
- AT2G22430
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G40060 | homeobox protein 16 homeobox protein 16 (HB16); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 6 (TAIR:AT2G22430.1); Has 9713 Blast hits to 9689 proteins in 534 species: Archae - 2; Bacteria - 4; Metazoa - 7673; Fungi - 210; Plants - 1646; Viruses - 5; Other Eukaryotes - 173 (source: NCBI BLink). Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. | 4 | - | View |
AT5G65310 | Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. homeobox protein 5 homeobox protein 5 (HB5); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, protein homodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, abscisic acid mediated signaling pathway, regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G02330 | No description available. | scaffold_7 | + | View |
AL8G32130 | No description available. | scaffold_8 | - | View |
AL4G01890 | No description available. | scaffold_4 | - | View |
AL4G02240 | No description available. | scaffold_4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G00940 | No description available. | A01 | - | View |
BR02G41050 | No description available. | A02 | - | View |
BR03G56130 | No description available. | A03 | + | View |
BR04G12540 | No description available. | A04 | - | View |
BR09G09670 | No description available. | A09 | + | View |
BR06G23230 | No description available. | A06 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G05200 | No description available. | Bvchr6.sca005 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G18850 | No description available. | Chr1 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00055G00670 | No description available. | supercontig_55 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G01510 | No description available. | scaffold_4 | - | View |
CRU_008G25410 | No description available. | scaffold_8 | - | View |
CRU_004G01840 | No description available. | scaffold_4 | - | View |
CRU_007G01930 | No description available. | scaffold_7 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00059G00640 | No description available. | scaffold00059 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G03270 | No description available. | scaffold_6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM18G01830 | No description available. | Gm18 | + | View |
GM08G14130 | No description available. | Gm08 | + | View |
GM11G37920 | No description available. | Gm11 | + | View |
GM05G30940 | No description available. | Gm05 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G11150 | No description available. | Chr11 | + | View |
GR08G09110 | No description available. | Chr08 | - | View |
GR07G23520 | No description available. | Chr07 | - | View |
GR03G04150 | No description available. | Chr03 | - | View |
GR10G03780 | No description available. | Chr10 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08265G01310 | No description available. | scaffold08265 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G086790 | homeobox associated leucine zipper protein | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G20020 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G09710 | No description available. | Chr07 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G051460 | Homeobox-leucine zipper protein (AHRD V1 ***- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associated | ch05 | + | View |
SL11G010270 | Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR001356 Homeobox | ch11 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G009430 | Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL); contains Interpro domain(s) IPR001356 Homeobox | chr11 | + | View |
ST05G023910 | Homeobox-leucine zipper protein (AHRD V1 ***- Q9FXN8_ZINEL); contains Interpro domain(s) IPR003106 Leucine zipper, homeobox-associated | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G09170 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G28420 | similar to AT5G65310|ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5) | ch2-4 | - | View |
TP4G01450 | similar to AT2G22430|ATHB6 | ch4-1 | - | View |
TP7G35790 | similar to AT4G40060|ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16) | ch7-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G02740 | name=GSVIVG01003431001; | chr7 | - | View |
VV18G03960 | name=GSVIVG01009083001; | chr18 | - | View |