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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AT2G20610
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G28410 | Tyrosine transaminase family protein Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT2G20610.1); Has 36818 Blast hits to 36812 proteins in 2952 species: Archae - 883; Bacteria - 26284; Metazoa - 751; Fungi - 692; Plants - 1240; Viruses - 0; Other Eukaryotes - 6968 (source: NCBI BLink). | 4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G41510 | No description available. | scaffold_3 | - | View |
| AL7G13410 | No description available. | scaffold_7 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G50320 | No description available. | A03 | + | View |
| BR01G08700 | No description available. | A01 | - | View |
| BR07G00190 | No description available. | A07 | + | View |
| BR09G45150 | No description available. | A09 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL02G17950 | No description available. | Chr2 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00020G01340 | No description available. | CM3.5_scaffold00020 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G11560 | No description available. | scaffold_7 | - | View |
| CRU_003G33750 | No description available. | scaffold_3 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0001G15210 | No description available. | scaffold_1 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G21820 | Tyrosine aminotransferase (TAT) (probable) | LG6 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM12G33350 | No description available. | Gm12 | + | View |
| GM13G37071 | No description available. | Gm13 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR05G19990 | No description available. | Chr05 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD17G017680 | No description available. | 17 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02307G00300 | No description available. | scaffold02307 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT2G090615 | tyrosine/nicotianamine family aminotransferase | chr2 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT07G13780 | No description available. | Chr07 | - | View |
| PT17G01380 | No description available. | Chr17 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29983G00420 | No description available. | 29983 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL07G053710 | Tyrosine aminotransferase (AHRD V1 **** D3K4J1_PAPSO)%3B contains Interpro domain(s) IPR005958 Tyrosine/nicotianamine aminotransferase | ch07 | - | View |
| SL10G008200 | Tyrosine aminotransferase (AHRD V1 **** D3K4J1_PAPSO)%3B contains Interpro domain(s) IPR005958 Tyrosine/nicotianamine aminotransferase | ch10 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G17890 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G33850 | similar to AT5G36160|aminotransferase-related | ch3-6 | - | View |
| TP7G26390 | similar to AT4G28410|aminotransferase-related | ch7-5 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV12G01940 | name=GSVIVG01020594001; | chr12 | - | View |