Anchorpoints
- Gene id
- AT2G19760
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G29340 | profilin 4 (PRF4); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization, actin cytoskeleton organization; LOCATED IN: nucleus, actin cytoskeleton, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097), Profilin, plant (InterPro:IPR005455); BEST Arabidopsis thaliana protein match is: profilin 5 (TAIR:AT2G19770.1); Has 899 Blast hits to 898 proteins in 239 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 117; Plants - 583; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). profilin 4 Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining. | 4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G36410 | No description available. | scaffold_3 | + | View |
AL7G12380 | No description available. | scaffold_7 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G09830 | No description available. | A10 | - | View |
BR09G10340 | No description available. | A09 | - | View |
BR09G45460 | No description available. | A09 | + | View |
BR03G50880 | No description available. | A03 | + | View |
BR08G16360 | No description available. | A08 | - | View |
BR01G07970 | No description available. | A01 | - | View |
BR07G01100 | No description available. | A07 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL11G16950 | No description available. | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00003G07290 | Profilin | CM3.5_scaffold00003 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00078G00310 | No description available. | supercontig_78 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G10580 | No description available. | scaffold_7 | - | View |
CRU_003G32720 | No description available. | scaffold_3 | - | View |
CRU_008G16660 | No description available. | scaffold_8 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G07940 | No description available. | scaffold_3 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G35990 | Profilin (putative) | scf0513146 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G03640 | No description available. | Gm08 | + | View |
GM01G00920 | No description available. | Gm01 | + | View |
GM05G35970 | No description available. | Gm05 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G07840 | No description available. | Chr10 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME00847G00300 | No description available. | scaffold00847 | + | View |
ME09501G00280 | No description available. | scaffold09501 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G102330 | profilin | chr8 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G23710 | No description available. | scaffold_7 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G008590 | Profilin (AHRD V1 ***- D6BRE6_9ROSI)%3B contains Interpro domain(s) IPR005455 Profilin%2C plant | ch12 | - | View |
SL12G044630 | Profilin (AHRD V1 ***- Q9SMC0_TOBAC)%3B contains Interpro domain(s) IPR005455 Profilin%2C plant Profilin-1 | ch12 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G009750 | Profilin (AHRD V1 ***- D6BRE6_9ROSI); contains Interpro domain(s) IPR005455 Profilin, plant | chr12 | - | View |
ST12G022440 | Profilin (AHRD V1 ***- Q9SMC0_TOBAC); contains Interpro domain(s) IPR005455 Profilin, plant | chr12 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G27220 | similar to AT4G29340|PRF4 (PROFILIN 4) | ch7-5 | + | View |
TP6G18380 | similar to AT5G56600|PRF3 (PROFILIN 3) | ch6-6 | - | View |
TP3G33090 | similar to AT2G19760|PRF1 (PROFILIN 1) | ch3-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV04G07670 | name=GSVIVG01035320001; | chr4 | - | View |
VV11G04280 | name=GSVIVG01015280001; | chr11 | + | View |