Anchorpoints

Gene id
AT2G17800
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G51300RHO-related protein from plants 1 RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.3+View
AT1G20090RHO-related protein from plants 2 (ROP2); CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1); Has 24645 Blast hits to 24619 proteins in 682 species: Archae - 9; Bacteria - 67; Metazoa - 12700; Fungi - 3846; Plants - 2697; Viruses - 20; Other Eukaryotes - 5306 (source: NCBI BLink). Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening. RHO-related protein from plants 21+View
AT1G75840RAC-like GTP binding protein 5 RAC-like GTP binding protein 5 (ARAC5); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RHO-related protein from plants 2 (TAIR:AT1G20090.1); Has 24632 Blast hits to 24606 proteins in 682 species: Archae - 9; Bacteria - 69; Metazoa - 12688; Fungi - 3833; Plants - 2700; Viruses - 20; Other Eukaryotes - 5313 (source: NCBI BLink). Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.1+View
AT4G35950RAC-like 6 A member of ROP GTPases gene family-like. GTP binding protein Arac6. RAC-like 6 (RAC6); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24191 Blast hits to 24163 proteins in 668 species: Archae - 9; Bacteria - 59; Metazoa - 12632; Fungi - 3489; Plants - 2692; Viruses - 20; Other Eukaryotes - 5290 (source: NCBI BLink).4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G04800No description available.scaffold_7+View
AL5G20930No description available.scaffold_5+View
AL1G21170No description available.scaffold_1+View
AL3G38610No description available.scaffold_3+View
AL2G24770No description available.scaffold_2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G55030No description available.A03-View
BR10G16880No description available.A10-View
BR01G02510No description available.A01+View
BR08G25250No description available.A08-View
BR07G31110No description available.A07+View
BR03G41960No description available.A03+View
BR09G09170No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G17000No description available.Bvchr6.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G01580No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G00610No description available.CM3.5_scaffold00021-View
CM00045G01000No description available.CM3.5_scaffold00045+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G02810No description available.supercontig_6+View
CP00026G03050No description available.supercontig_26-View
CP00037G01350No description available.supercontig_37-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G18800No description available.scaffold_1+View
CRU_005G16550No description available.scaffold_5+View
CRU_002G21460No description available.scaffold_2+View
CRU_003G30730No description available.scaffold_3+View
CRU_007G03990No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00023G00670No description available.scaffold00023+View
CS00017G01500No description available.scaffold00017+View
CS00002G05770No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G19610No description available.scaffold_9-View
EG0010G21380No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G38250Rac-like GTP-binding protein ARAC1, Precursor (similar to)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G02530No description available.Gm04-View
GM06G02580No description available.Gm06-View
GM11G08380No description available.Gm11+View
GM01G36880No description available.Gm01-View
GM02G05160No description available.Gm02+View
GM16G23340No description available.Gm16+View
GM12G03660No description available.Gm12+View
GM11G11510No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G00800No description available.Chr03-View
GR09G19330No description available.Chr09-View
GR07G19230No description available.Chr07-View
GR08G03610No description available.Chr08+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G029090No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G011000No description available.2+View
MD15G017900No description available.15-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G01370No description available.scaffold06512+View
ME07520G02850No description available.scaffold07520+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G075240Rho-like GTP-binding proteinchr8+View
MT5G022600Rho-like GTP-binding proteinchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G19230No description available.scaffold_7+View
PPE_001G37130No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G24200No description available.Chr05+View
PT07G06150No description available.Chr07+View
PT05G11070No description available.Chr05-View
PT02G01950No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G05730No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G033420Rho-related GTP-binding protein RhoC (AHRD V1 **-- RHOC_PONAB)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho typech03-View
SL02G083580Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho typech02-View
SL02G062020Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho typech02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G026890Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho typechr02-View
ST03G009070Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho typechr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G01380No description available.scaffold_1-View
TC0008G04570No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G31210similar to AT2G17800|ARAC1ch3-6+View
TP7G33730similar to AT4G35950|ARAC6 (ARABIDOPSIS RAC-LIKE 6)ch7-6-View
TP5G30980similar to AT1G75840|ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)ch5-7+View
TP1G17860similar to AT1G20090|ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G10940name=GSVIVG01009947001;chr18+View


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Gene id
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Description
Chromosome
Strand