Anchorpoints
- Gene id
- AT1G78390
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G14440 | nine-cis-epoxycarotenoid dioxygenase 3 (NCED3); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16; Bacteria - 796; Metazoa - 281; Fungi - 204; Plants - 893; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). nine-cis-epoxycarotenoid dioxygenase 3 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. | 3 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G27390 | No description available. | scaffold_2 | - | View |
AL3G15320 | No description available. | scaffold_3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G28530 | No description available. | A05 | + | View |
BR03G33970 | No description available. | A03 | - | View |
BR07G33150 | No description available. | A07 | - | View |
BR02G24770 | No description available. | A02 | - | View |
BR01G33990 | No description available. | A01 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G15150 | No description available. | Chr7 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM01596G01760 | No description available. | CM3.5_scaffold01596 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00077G01030 | No description available. | supercontig_77 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G13480 | No description available. | scaffold_3 | - | View |
CRU_002G23880 | No description available. | scaffold_2 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G11210 | No description available. | scaffold_6 | + | View |
EG0006G27040 | No description available. | scaffold_6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM15G40070 | No description available. | Gm15 | + | View |
GM12G36530 | No description available. | Gm12 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G03810 | No description available. | Chr02 | - | View |
GR13G17710 | No description available. | Chr13 | + | View |
GR04G27080 | No description available. | Chr04 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G070460 | 9-cis-epoxycarotenoid dioxygenase | chr2 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G025690 | 9-cis-epoxycarotenoid dioxygenase (AHRD V1 **** O24023_SOLLC); contains Interpro domain(s) IPR004294 Carotenoid oxygenase | chr07 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G14670 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G33490 | similar to AT1G78390|NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9) | ch5-7 | - | View |