Anchorpoints

Gene id
AT1G77630
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G21880lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1 precursor (LYM1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G77630.1); Has 660 Blast hits to 639 proteins in 131 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 1; Plants - 404; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G26590No description available.scaffold_2+View
AL1G23150No description available.scaffold_1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G24390No description available.A02+View
BR08G24500No description available.A08-View
BR06G15990No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G09620No description available.Bvchr1.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G05600No description available.Chr8-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM01598G00250No description available.CM3.5_scaffold01598-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00036G00520No description available.supercontig_36-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G20450No description available.scaffold_1+View
CRU_002G23170No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G00920No description available.scaffold00004+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G32300No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G29200LysM domain-containing GPI-anchored protein 1, Precursor (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G11820No description available.Gm06-View
GM04G42930No description available.Gm04-View
GM13G03185No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G04970No description available.Chr10-View
GR02G22170No description available.Chr02-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G017610No description available.12+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06853G00130No description available.scaffold06853+View
ME07238G00120No description available.scaffold07238-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G072410LysM domain GPI-anchored proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G50470No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G17670No description available.Chr05-View
PT02G08480No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29908G00560No description available.29908-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G012870LysM domain containing protein (AHRD V1 *-*- Q2R2V0_ORYSJ)%3B contains Interpro domain(s) IPR002482 Peptidoglycan-binding Lysin subgroupch11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G11960No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G19420similar to AT1G21880|LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)ch1-1+View
TP5G32790similar to AT1G77630|peptidoglycan-binding LysM domain-containing proteinch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G02250name=GSVIVG01008882001;chr18+View


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Gene id
Species
Description
Chromosome
Strand