Anchorpoints
- Gene id
- AT1G77630
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G21880 | lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1 precursor (LYM1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G77630.1); Has 660 Blast hits to 639 proteins in 131 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 1; Plants - 404; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. | 1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G26590 | No description available. | scaffold_2 | + | View |
AL1G23150 | No description available. | scaffold_1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G24390 | No description available. | A02 | + | View |
BR08G24500 | No description available. | A08 | - | View |
BR06G15990 | No description available. | A06 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV1G09620 | No description available. | Bvchr1.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G05600 | No description available. | Chr8 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM01598G00250 | No description available. | CM3.5_scaffold01598 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00036G00520 | No description available. | supercontig_36 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G20450 | No description available. | scaffold_1 | + | View |
CRU_002G23170 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00004G00920 | No description available. | scaffold00004 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G32300 | No description available. | scaffold_6 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G29200 | LysM domain-containing GPI-anchored protein 1, Precursor (similar to) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM06G11820 | No description available. | Gm06 | - | View |
GM04G42930 | No description available. | Gm04 | - | View |
GM13G03185 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G04970 | No description available. | Chr10 | - | View |
GR02G22170 | No description available. | Chr02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G017610 | No description available. | 12 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06853G00130 | No description available. | scaffold06853 | + | View |
ME07238G00120 | No description available. | scaffold07238 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G072410 | LysM domain GPI-anchored protein | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G50470 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G17670 | No description available. | Chr05 | - | View |
PT02G08480 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29908G00560 | No description available. | 29908 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G012870 | LysM domain containing protein (AHRD V1 *-*- Q2R2V0_ORYSJ)%3B contains Interpro domain(s) IPR002482 Peptidoglycan-binding Lysin subgroup | ch11 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G11960 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G19420 | similar to AT1G21880|LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR) | ch1-1 | + | View |
TP5G32790 | similar to AT1G77630|peptidoglycan-binding LysM domain-containing protein | ch5-7 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G02250 | name=GSVIVG01008882001; | chr18 | + | View |