Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G75840
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G51300 | RHO-related protein from plants 1 RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein. | 3 | + | View |
| AT1G20090 | RHO-related protein from plants 2 (ROP2); CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1); Has 24645 Blast hits to 24619 proteins in 682 species: Archae - 9; Bacteria - 67; Metazoa - 12700; Fungi - 3846; Plants - 2697; Viruses - 20; Other Eukaryotes - 5306 (source: NCBI BLink). Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening. RHO-related protein from plants 2 | 1 | + | View |
| AT4G35020 | RAC-like 3 (RAC3); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like GTP binding protein 5 (TAIR:AT1G75840.1); Has 24715 Blast hits to 24687 proteins in 684 species: Archae - 9; Bacteria - 73; Metazoa - 12739; Fungi - 3851; Plants - 2699; Viruses - 20; Other Eukaryotes - 5324 (source: NCBI BLink). A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein. RAC-like 3 | 4 | + | View |
| AT4G35950 | RAC-like 6 A member of ROP GTPases gene family-like. GTP binding protein Arac6. RAC-like 6 (RAC6); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24191 Blast hits to 24163 proteins in 668 species: Archae - 9; Bacteria - 59; Metazoa - 12632; Fungi - 3489; Plants - 2692; Viruses - 20; Other Eukaryotes - 5290 (source: NCBI BLink). | 4 | - | View |
| AT2G17800 | Arabidopsis RAC-like 1 (ARAC1); FUNCTIONS IN: GTP binding; INVOLVED IN: auxin mediated signaling pathway, abscisic acid mediated signaling pathway; LOCATED IN: nucleus, cytoplasm, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 6 (TAIR:AT4G35950.1); Has 24212 Blast hits to 24183 proteins in 668 species: Archae - 9; Bacteria - 59; Metazoa - 12648; Fungi - 3488; Plants - 2694; Viruses - 20; Other Eukaryotes - 5294 (source: NCBI BLink). Arabidopsis RAC-like 1 A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. | 2 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G04800 | No description available. | scaffold_7 | + | View |
| AL5G20930 | No description available. | scaffold_5 | + | View |
| AL7G05940 | No description available. | scaffold_7 | - | View |
| AL1G21170 | No description available. | scaffold_1 | + | View |
| AL3G38610 | No description available. | scaffold_3 | + | View |
| AL2G24770 | No description available. | scaffold_2 | + | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00152G00020 | No description available. | scaffold00152 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G55030 | No description available. | A03 | - | View |
| BR10G16880 | No description available. | A10 | - | View |
| BR01G02510 | No description available. | A01 | + | View |
| BR08G25250 | No description available. | A08 | - | View |
| BR10G17860 | No description available. | A10 | - | View |
| BR07G31110 | No description available. | A07 | + | View |
| BR07G19800 | No description available. | A07 | - | View |
| BR07G10610 | No description available. | A07 | - | View |
| BR09G09170 | No description available. | A09 | + | View |
| BR02G23460 | No description available. | A02 | + | View |
| BR01G03240 | No description available. | A01 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV9G02250 | No description available. | Bvchr9.sca025 | - | View |
| BV0G28370 | No description available. | Bvchr1_un.sca004 | + | View |
| BV6G17000 | No description available. | Bvchr6.sca002 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL02G12150 | No description available. | Chr2 | + | View |
| CL08G13940 | No description available. | Chr8 | - | View |
| CL10G01580 | No description available. | Chr10 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00021G00610 | No description available. | CM3.5_scaffold00021 | - | View |
| CM00045G01000 | No description available. | CM3.5_scaffold00045 | + | View |
| CM00014G07250 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00006G02810 | No description available. | supercontig_6 | + | View |
| CP00026G03050 | No description available. | supercontig_26 | - | View |
| CP00037G01350 | No description available. | supercontig_37 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G04970 | No description available. | scaffold_7 | - | View |
| CRU_001G18800 | No description available. | scaffold_1 | + | View |
| CRU_003G30730 | No description available. | scaffold_3 | + | View |
| CRU_002G21460 | No description available. | scaffold_2 | + | View |
| CRU_007G03990 | No description available. | scaffold_7 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00023G00670 | No description available. | scaffold00023 | + | View |
| CS00017G01500 | No description available. | scaffold00017 | + | View |
| CS00002G05770 | No description available. | scaffold00002 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G13130 | No description available. | scaffold_7 | + | View |
| EG0009G19610 | No description available. | scaffold_9 | - | View |
| EG0009G11510 | No description available. | scaffold_9 | + | View |
| EG0010G21380 | No description available. | scaffold_10 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G07360 | Rac-like GTP-binding protein ARAC5, Precursor (similar to) | LG2 | + | View |
| FV2G38250 | Rac-like GTP-binding protein ARAC1, Precursor (similar to) | LG2 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM04G02530 | No description available. | Gm04 | - | View |
| GM06G02580 | No description available. | Gm06 | - | View |
| GM11G08380 | No description available. | Gm11 | + | View |
| GM01G36880 | No description available. | Gm01 | - | View |
| GM16G23340 | No description available. | Gm16 | + | View |
| GM12G03660 | No description available. | Gm12 | + | View |
| GM11G11510 | No description available. | Gm11 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR10G00260 | No description available. | Chr10 | - | View |
| GR02G19750 | No description available. | Chr02 | + | View |
| GR09G26960 | No description available. | Chr09 | - | View |
| GR05G11250 | No description available. | Chr05 | + | View |
| GR03G00800 | No description available. | Chr03 | - | View |
| GR09G19330 | No description available. | Chr09 | - | View |
| GR07G19230 | No description available. | Chr07 | - | View |
| GR08G03610 | No description available. | Chr08 | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ2G029090 | No description available. | chr2 | - | View |
| LJ1G042580 | No description available. | chr1 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD02G011000 | No description available. | 2 | + | View |
| MD15G017900 | No description available. | 15 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11821G00110 | No description available. | scaffold11821 | - | View |
| ME06512G01370 | No description available. | scaffold06512 | + | View |
| ME07520G02850 | No description available. | scaffold07520 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT8G075240 | Rho-like GTP-binding protein | chr8 | + | View |
| MT5G022600 | Rho-like GTP-binding protein | chr5 | + | View |
| MT4G073250 | Rho-like GTP-binding protein | chr4 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS02G58730 | ras-related protein, putative, expressed Rac-like GTP-binding protein 5 | 2 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_008G18240 | No description available. | scaffold_8 | + | View |
| PPE_007G19230 | No description available. | scaffold_7 | + | View |
| PPE_001G37130 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G24200 | No description available. | Chr05 | + | View |
| PT07G06150 | No description available. | Chr07 | + | View |
| PT05G11070 | No description available. | Chr05 | - | View |
| PT04G17490 | No description available. | Chr04 | + | View |
| PT09G13460 | No description available. | Chr09 | + | View |
| PT02G01950 | No description available. | Chr02 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30170G05730 | No description available. | 30170 | + | View |
| RC28962G00290 | No description available. | 28962 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G033420 | Rho-related GTP-binding protein RhoC (AHRD V1 **-- RHOC_PONAB)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho type | ch03 | - | View |
| SL02G083580 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho type | ch02 | - | View |
| SL01G111560 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho type | ch01 | + | View |
| SL10G055520 | GTP-binding RHO-like protein (AHRD V1 ***- CRL1_CANAL)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho type | ch10 | + | View |
| SL02G062020 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA)%3B contains Interpro domain(s) IPR003578 Ras small GTPase%2C Rho type | ch02 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST01G048970 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho type | chr01 | + | View |
| ST02G026890 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho type | chr02 | - | View |
| ST03G009070 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho type | chr03 | - | View |
| ST02G009800 | Ras-like GTP-binding protein RHO (AHRD V1 **-- RHO_APLCA); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho type | chr02 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G05820 | No description available. | scaffold_2 | - | View |
| TC0001G01380 | No description available. | scaffold_1 | - | View |
| TC0008G04570 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G31210 | similar to AT2G17800|ARAC1 | ch3-6 | + | View |
| TP7G32780 | similar to AT4G35020|ARAC3 (ARABIDOPSIS RAC-LIKE 3) | ch7-5 | + | View |
| TP7G33730 | similar to AT4G35950|ARAC6 (ARABIDOPSIS RAC-LIKE 6) | ch7-6 | - | View |
| TP5G30980 | similar to AT1G75840|ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5) | ch5-7 | + | View |
| TP1G17860 | similar to AT1G20090|ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) | ch1-1 | + | View |
| TP3G29990 | similar to AT4G35020|ARAC3 (ARABIDOPSIS RAC-LIKE 3) | ch3-5 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G10940 | name=GSVIVG01009947001; | chr18 | + | View |
| VV04G00320 | name=GSVIVG01018729001; | chr4 | + | View |
| VV03G04760 | name=GSVIVG01024029001; | chr3 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM05G17680 | Rho-related protein from plants 9;Rho-related protein from plants 9 | 5 | - | View |