Anchorpoints

Gene id
AT1G74930
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G19210encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).1-View
AT4G36900related to AP2 10 (RAP2.10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 3 (TAIR:AT2G23340.1); Has 5719 Blast hits to 5612 proteins in 252 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 5703; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1. related to AP2 104+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G23810No description available.scaffold_2+View
AL1G20160No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G20210No description available.A07-View
BR06G13760No description available.A06-View
BR07G30360No description available.A07+View
BR08G25660No description available.A08+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G14350No description available.Bvchr8.sca017-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G14540No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00025G03420No description available.CM3.5_scaffold00025-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G18010No description available.scaffold_1-View
CRU_002G20510No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00013G02080No description available.scaffold00013+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G06350No description available.scaffold_3+View
EG0003G25780No description available.scaffold_3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G19910No description available.Gm15-View
GM13G17250No description available.Gm13-View
GM09G08330No description available.Gm09-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G22270No description available.Chr13+View
GR10G09110No description available.Chr10-View
GR04G28520No description available.Chr04+View
GR09G03700No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G015620No description available.chr6+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G015980No description available.15+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G043020ethylene-responsive transcription factor ERF017-like proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G21420No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G04730No description available.Chr18+View
PT06G13870No description available.Chr06+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29739G01510No description available.29739+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G042230Ethylene-responsive transcription factor 7 (AHRD V1 *-** ERF83_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST12G008760Ethylene-responsive transcription factor 1 (AHRD V1 *-*- ERF1_ORYSJ); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G06890No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G17110similar to AT1G19210|AP2 domain-containing transcription factor, putativech1-1-View
TP5G30070similar to AT1G74930|ORA47ch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G02190name=GSVIVG01015037001;chr11+View


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Gene id
Species
Description
Chromosome
Strand