Anchorpoints

Gene id
AT1G72520
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G17420LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs). lipoxygenase 3 lipoxygenase 3 (LOX3); FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, response to fungus, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1470 Blast hits to 1436 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 529; Fungi - 49; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G21330No description available.scaffold_2+View
AL1G18330No description available.scaffold_1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G26500No description available.A08-View
BR02G21590No description available.A02+View
BR09G46570No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G02810No description available.Bvchr7.sca021+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G00750No description available.Chr9-View
CL02G23490No description available.Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00067G01300No description available.CM3.5_scaffold00067+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00025G01270No description available.supercontig_25-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G18290No description available.scaffold_2+View
CRU_001G16390No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00032G00300No description available.scaffold00032+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G23960No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G15980Lipoxygenase 4, chloroplastic (AtLOX4), Precursor (similar to)scf0513160-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G04480No description available.Gm07-View
GM03G42500No description available.Gm03+View
GM19G45280No description available.Gm19+View
GM16G01070No description available.Gm16-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G06040No description available.Chr11-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G036410No description available.chr3+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G007170No description available.16-View
MD13G026310No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12525G00060No description available.scaffold12525+View
ME05875G01150No description available.scaffold05875-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G099560seed linoleate 9S-lipoxygenasechr2+View
MT8G020970linoleate 13S-lipoxygenase 2-1 C related proteinchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G37430lipoxygenase protein, putative, expressed4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G02570No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G06760No description available.Chr03+View
PT01G16770No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G122340Lipoxygenase (AHRD V1 **** Q96574_SOLLC)%3B contains Interpro domain(s) IPR001246 Lipoxygenase%2C plantch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G006520Lipoxygenase (AHRD V1 ***- B9SMP7_RICCO); contains Interpro domain(s) IPR001246 Lipoxygenase, plantchr09+View
ST03G034620Lipoxygenase (AHRD V1 **** O24371_SOLTU); contains Interpro domain(s) IPR001246 Lipoxygenase, plantchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G12120No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G15560similar to AT1G17420|LOX3ch1-1+View
TP5G27600similar to AT1G72520|lipoxygenase, putativech5-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G02280name=GSVIVG01016738001;chr9+View


Download

Gene id
Species
Description
Chromosome
Strand