Anchorpoints
- Gene id
- AT1G72520
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G17420 | LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs). lipoxygenase 3 lipoxygenase 3 (LOX3); FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, response to fungus, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT1G72520.1); Has 1470 Blast hits to 1436 proteins in 179 species: Archae - 0; Bacteria - 76; Metazoa - 529; Fungi - 49; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | 1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G21330 | No description available. | scaffold_2 | + | View |
AL1G18330 | No description available. | scaffold_1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G26500 | No description available. | A08 | - | View |
BR02G21590 | No description available. | A02 | + | View |
BR09G46570 | No description available. | A09 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G02810 | No description available. | Bvchr7.sca021 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G00750 | No description available. | Chr9 | - | View |
CL02G23490 | No description available. | Chr2 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00067G01300 | No description available. | CM3.5_scaffold00067 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00025G01270 | No description available. | supercontig_25 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G18290 | No description available. | scaffold_2 | + | View |
CRU_001G16390 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00032G00300 | No description available. | scaffold00032 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G23960 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G15980 | Lipoxygenase 4, chloroplastic (AtLOX4), Precursor (similar to) | scf0513160 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G04480 | No description available. | Gm07 | - | View |
GM03G42500 | No description available. | Gm03 | + | View |
GM19G45280 | No description available. | Gm19 | + | View |
GM16G01070 | No description available. | Gm16 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G06040 | No description available. | Chr11 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G036410 | No description available. | chr3 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G007170 | No description available. | 16 | - | View |
MD13G026310 | No description available. | 13 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME12525G00060 | No description available. | scaffold12525 | + | View |
ME05875G01150 | No description available. | scaffold05875 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G099560 | seed linoleate 9S-lipoxygenase | chr2 | + | View |
MT8G020970 | linoleate 13S-lipoxygenase 2-1 C related protein | chr8 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS04G37430 | lipoxygenase protein, putative, expressed | 4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G02570 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G06760 | No description available. | Chr03 | + | View |
PT01G16770 | No description available. | Chr01 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G122340 | Lipoxygenase (AHRD V1 **** Q96574_SOLLC)%3B contains Interpro domain(s) IPR001246 Lipoxygenase%2C plant | ch03 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G006520 | Lipoxygenase (AHRD V1 ***- B9SMP7_RICCO); contains Interpro domain(s) IPR001246 Lipoxygenase, plant | chr09 | + | View |
ST03G034620 | Lipoxygenase (AHRD V1 **** O24371_SOLTU); contains Interpro domain(s) IPR001246 Lipoxygenase, plant | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G12120 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G15560 | similar to AT1G17420|LOX3 | ch1-1 | + | View |
TP5G27600 | similar to AT1G72520|lipoxygenase, putative | ch5-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV09G02280 | name=GSVIVG01016738001; | chr9 | + | View |