Expansion plot
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G70310
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G23820 | spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5258 Blast hits to 5255 proteins in 1502 species: Archae - 169; Bacteria - 2896; Metazoa - 353; Fungi - 199; Plants - 416; Viruses - 0; Other Eukaryotes - 1225 (source: NCBI BLink). spermidine synthase 1 Spermidine synthase. | 1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G25630 | No description available. | scaffold_1 | + | View |
| AL2G18720 | No description available. | scaffold_2 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR07G08820 | No description available. | A07 | - | View |
| BR08G23780 | No description available. | A08 | - | View |
| BR09G30770 | No description available. | A09 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV6G10040 | No description available. | Bvchr6.sca027 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL05G26120 | No description available. | Chr5 | - | View |
| CL06G17460 | No description available. | Chr6 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00016G03240 | No description available. | CM3.5_scaffold00016 | + | View |
| CM00030G00250 | No description available. | CM3.5_scaffold00030 | + | View |
| CM00001G03510 | No description available. | CM3.5_scaffold00001 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G22390 | No description available. | scaffold_1 | + | View |
| CRU_002G16050 | No description available. | scaffold_2 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00020G01640 | No description available. | scaffold00020 | + | View |
| CS00003G02760 | No description available. | scaffold00003 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV5G05970 | Spermidine synthase 2 (SPDSY 2) (similar to) | LG5 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM05G01890 | No description available. | Gm05 | + | View |
| GM02G03860 | No description available. | Gm02 | - | View |
| GM08G39810 | No description available. | Gm08 | + | View |
| GM01G03830 | No description available. | Gm01 | + | View |
| GM06G19580 | No description available. | Gm06 | + | View |
| GM17G09870 | No description available. | Gm17 | + | View |
| GM18G18880 | No description available. | Gm18 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR05G18350 | No description available. | Chr05 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD14G018130 | No description available. | 14 | + | View |
| MD13G006360 | No description available. | 13 | - | View |
| MD06G014500 | No description available. | 6 | + | View |
| MD16G005050 | No description available. | 16 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME12794G01210 | No description available. | scaffold12794 | + | View |
| ME04083G00230 | No description available. | scaffold04083 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT5G034470 | spermidine synthase | chr5 | + | View |
| MT3G078190 | spermidine synthase | chr3 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G26640 | No description available. | scaffold_1 | + | View |
| PPE_005G18200 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL05G005710 | Spermidine synthase (AHRD V1 **** Q93X16_SOLTU)%3B contains Interpro domain(s) IPR001045 Spermine synthase Spermidine synthase | ch05 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST05G012890 | Spermidine synthase (AHRD V1 ***- Q93X16_SOLTU); contains Interpro domain(s) IPR001045 Spermine synthase | chr05 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0003G00820 | No description available. | scaffold_3 | - | View |
| TC0004G00730 | No description available. | scaffold_4 | - | View |
| TC0002G24420 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G25440 | similar to AT1G70310|SPDS2 (spermidine synthase 2) | ch5-6 | - | View |
| TP1G21190 | similar to AT1G23820|SPDS1 (spermidine synthase 1) | ch1-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G02030 | name=GSVIVG01007787001; | chr17 | - | View |
| VV01G13810 | name=GSVIVG01020222001; | chr1 | + | View |