Anchorpoints

Gene id
AT1G70000
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G74840Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G19000.2); Has 1391 Blast hits to 1386 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1204; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). Homeodomain-like superfamily protein1-View
AT1G19000Homeodomain-like superfamily protein Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G74840.1); Has 1188 Blast hits to 1183 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G23690No description available.scaffold_2-View
AL2G18290No description available.scaffold_2-View
AL1G19940No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G20140No description available.A02-View
BR07G22100No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G03990No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G17170No description available.Chr6-View
CL05G25800No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G00560No description available.CM3.5_scaffold00030+View
CM00016G03590No description available.CM3.5_scaffold00016+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00005G03080No description available.supercontig_5-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G20410No description available.scaffold_2-View
CRU_002G15750No description available.scaffold_2-View
CRU_001G17840No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G03350No description available.scaffold00003+View
CS00020G02110No description available.scaffold00020+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G20870No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G22660Myb-like protein J (probable)LG4-View
FV5G17970Myb-like protein J (similar to)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G03020No description available.Gm02-View
GM06G19960No description available.Gm06+View
GM01G04530No description available.Gm01+View
GM18G17143No description available.Gm18-View
GM05G01640No description available.Gm05-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G03400No description available.Chr07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G022650No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G004610No description available.16-View
MD13G005730No description available.13-View
MD06G014920No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04209G00300No description available.scaffold04209-View
ME12794G01570No description available.scaffold12794+View
ME11495G00990No description available.scaffold11495-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G037080MYB-like transcription factor family proteinchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G18740No description available.scaffold_5+View
PPE_001G27420No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G03930No description available.Chr10+View
PT12G07390No description available.Chr12-View
PT08G19180No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G07010No description available.30147+View
RC29736G00850No description available.29736-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G071230MYB transcription factor (AHRD V1 **** A1DR86_CATRO)%3B contains Interpro domain(s) IPR017930 Myb-type HTH DNA-binding domainch06-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G027260MYB transcription factor (AHRD V1 **** B2CZJ3_CAPAN); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class Transcription factor MYB1R1chr06-View
ST03G026970MYB transcription factor (AHRD V1 **** B2CZJ3_CAPAN); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF classchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G23740No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G25110similar to AT1G70000|DNA-binding family proteinch5-6-View
TP1G16960similar to AT1G19000|myb family transcription factorch1-1-View
TP5G29970similar to AT1G74840|myb family transcription factorch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G13150name=GSVIVG01020132001;chr1+View


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Gene id
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Description
Chromosome
Strand