Anchorpoints
- Gene id
- AT1G70000
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G74840 | Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G19000.2); Has 1391 Blast hits to 1386 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1204; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). Homeodomain-like superfamily protein | 1 | - | View |
AT1G19000 | Homeodomain-like superfamily protein Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G74840.1); Has 1188 Blast hits to 1183 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1018; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G23690 | No description available. | scaffold_2 | - | View |
AL2G18290 | No description available. | scaffold_2 | - | View |
AL1G19940 | No description available. | scaffold_1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G20140 | No description available. | A02 | - | View |
BR07G22100 | No description available. | A07 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G03990 | No description available. | Bvchr6.sca028 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G17170 | No description available. | Chr6 | - | View |
CL05G25800 | No description available. | Chr5 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00030G00560 | No description available. | CM3.5_scaffold00030 | + | View |
CM00016G03590 | No description available. | CM3.5_scaffold00016 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00005G03080 | No description available. | supercontig_5 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G20410 | No description available. | scaffold_2 | - | View |
CRU_002G15750 | No description available. | scaffold_2 | - | View |
CRU_001G17840 | No description available. | scaffold_1 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G03350 | No description available. | scaffold00003 | + | View |
CS00020G02110 | No description available. | scaffold00020 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G20870 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G22660 | Myb-like protein J (probable) | LG4 | - | View |
FV5G17970 | Myb-like protein J (similar to) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G03020 | No description available. | Gm02 | - | View |
GM06G19960 | No description available. | Gm06 | + | View |
GM01G04530 | No description available. | Gm01 | + | View |
GM18G17143 | No description available. | Gm18 | - | View |
GM05G01640 | No description available. | Gm05 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G03400 | No description available. | Chr07 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ2G022650 | No description available. | chr2 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G004610 | No description available. | 16 | - | View |
MD13G005730 | No description available. | 13 | - | View |
MD06G014920 | No description available. | 6 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04209G00300 | No description available. | scaffold04209 | - | View |
ME12794G01570 | No description available. | scaffold12794 | + | View |
ME11495G00990 | No description available. | scaffold11495 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G037080 | MYB-like transcription factor family protein | chr5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G18740 | No description available. | scaffold_5 | + | View |
PPE_001G27420 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G03930 | No description available. | Chr10 | + | View |
PT12G07390 | No description available. | Chr12 | - | View |
PT08G19180 | No description available. | Chr08 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30147G07010 | No description available. | 30147 | + | View |
RC29736G00850 | No description available. | 29736 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G071230 | MYB transcription factor (AHRD V1 **** A1DR86_CATRO)%3B contains Interpro domain(s) IPR017930 Myb-type HTH DNA-binding domain | ch06 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G027260 | MYB transcription factor (AHRD V1 **** B2CZJ3_CAPAN); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class Transcription factor MYB1R1 | chr06 | - | View |
ST03G026970 | MYB transcription factor (AHRD V1 **** B2CZJ3_CAPAN); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G23740 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G25110 | similar to AT1G70000|DNA-binding family protein | ch5-6 | - | View |
TP1G16960 | similar to AT1G19000|myb family transcription factor | ch1-1 | - | View |
TP5G29970 | similar to AT1G74840|myb family transcription factor | ch5-7 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G13150 | name=GSVIVG01020132001; | chr1 | + | View |