Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G66200
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G37600 | glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium glutamine synthase clone R1 | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL2G13170 | No description available. | scaffold_2 | - | View |
| AL7G34640 | No description available. | scaffold_7 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G17850 | No description available. | A02 | - | View |
| BR04G07740 | No description available. | A04 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL03G08520 | No description available. | Chr3 | + | View |
| CL05G12680 | No description available. | Chr5 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00042G00420 | No description available. | CM3.5_scaffold00042 | + | View |
| CM00055G00590 | No description available. | CM3.5_scaffold00055 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00116G00730 | No description available. | supercontig_116 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_002G11410 | No description available. | scaffold_2 | - | View |
| CRU_007G31380 | No description available. | scaffold_7 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00197G00240 | No description available. | scaffold00197 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0006G23910 | No description available. | scaffold_6 | + | View |
| EG0010G13990 | No description available. | scaffold_10 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM11G33560 | No description available. | Gm11 | - | View |
| GM18G04650 | No description available. | Gm18 | + | View |
| GM02G41106 | No description available. | Gm02 | - | View |
| GM14G39420 | Glutamine synthetase cytosolic isozyme 2 | Gm14 | - | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ6G003380 | Glutamine synthetase cytosolic isozyme | chr6 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME07520G00210 | No description available. | scaffold07520 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT3G065250 | glutamine synthetase domain protein | chr3 | - | View |
| MT5G077950 | glutamine synthetase domain protein | chr5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT04G08540 | No description available. | Chr04 | + | View |
| PT17G13110 | No description available. | Chr17 | - | View |
| PT17G13680 | No description available. | Chr17 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL11G011380 | Glutamine synthetase (AHRD V1 ***- Q42950_TOBAC)%3B contains Interpro domain(s) IPR008146 Glutamine synthetase%2C catalytic region | ch11 | + | View |
| SL04G014510 | Glutamine synthetase (AHRD V1 ***- Q5QJ64_9SOLA)%3B contains Interpro domain(s) IPR008146 Glutamine synthetase%2C catalytic region | ch04 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST04G011590 | Glutamine synthetase (AHRD V1 ***- Q5QJ64_9SOLA); contains Interpro domain(s) IPR008146 Glutamine synthetase, catalytic region | chr04 | + | View |
| ST11G008040 | Glutamine synthetase (AHRD V1 ***- Q9FPT9_SOLTU); contains Interpro domain(s) IPR008146 Glutamine synthetase, catalytic region | chr11 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP5G21260 | similar to AT1G66200|ATGSR2 | ch5-5 | - | View |
| TP7G04500 | similar to AT5G37600|ATGSR1 | ch7-1 | + | View |