Anchorpoints
- Gene id
- AT1G53600
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G42920 | Pentatricopeptide repeat (PPR-like) superfamily protein Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48910.1); Has 37919 Blast hits to 14277 proteins in 266 species: Archae - 0; Bacteria - 16; Metazoa - 156; Fungi - 107; Plants - 36994; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). | 2 | + | View |
AT3G14730 | Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 39287 Blast hits to 13376 proteins in 233 species: Archae - 0; Bacteria - 3; Metazoa - 52; Fungi - 106; Plants - 38683; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). Pentatricopeptide repeat (PPR) superfamily protein | 3 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G48750 | No description available. | scaffold_1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G33830 | No description available. | A01 | + | View |
BR06G01030 | No description available. | A06 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G01630 | No description available. | Bvchr7.sca021 | + | View |
BV6G07430 | No description available. | Bvchr6.sca003 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G12200 | No description available. | Chr7 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00050G00870 | No description available. | supercontig_50 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G13690 | No description available. | scaffold_3 | - | View |
CRU_001G40810 | No description available. | scaffold_1 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G11170 | No description available. | scaffold_6 | + | View |
EG0006G27160 | No description available. | scaffold_6 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G30520 | No description available. | Gm13 | - | View |
GM13G33512 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR13G19190 | No description available. | Chr13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03542G00240 | No description available. | scaffold03542 | + | View |
ME10504G00030 | No description available. | scaffold10504 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G14390 | No description available. | scaffold_4 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G011400 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M3D7_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch12 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G006280 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M3D7_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr12 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G40100 | similar to AT1G53600|pentatricopeptide (PPR) repeat-containing protein | ch1-2 | + | View |
TP3G12960 | similar to AT3G14730|pentatricopeptide (PPR) repeat-containing protein | ch3-1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G02680 | No description available. | 9 | + | View |