Anchorpoints

Gene id
AT1G53310
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G14940phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.3+View
AT2G42600phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink). Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G15710No description available.scaffold_3+View
AL1G48400No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G28100No description available.A05-View
BR03G34200No description available.A03+View
BR08G01380No description available.A08+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G11510No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00081G00520No description available.CM3.5_scaffold00081+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G40550No description available.scaffold_1-View
CRU_003G13880No description available.scaffold_3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G10000No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G35840Phosphoenolpyruvate carboxylaseGm12-View
GM13G34560No description available.Gm13+View
GM06G33380No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G06140No description available.Chr02+View
GR06G00130No description available.Chr06+View
GR13G17350No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G004570No description available.chr3+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G021040No description available.3-View
MD11G023660No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03741G00370No description available.scaffold03741+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G463920phosphoenolpyruvate carboxylasechr8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G15880No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G39190No description available.Chr01+View
PT11G11070No description available.Chr11+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G062530Phosphoenolpyruvate carboxylase 2 (AHRD V1 ***- Q9SCB2_SOLLC)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech07+View
SL12G014250Phosphoenolpyruvate carboxylase 1 (AHRD V1 ***- Q9SCB3_SOLLC)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech12-View
SL10G007290Phosphoenolpyruvate carboxylase (AHRD V1 ***- A6YM32_RICCO)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G024710Phosphoenolpyruvate carboxylase 2 (AHRD V1 ***- Q9SCB2_SOLLC); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylasechr07-View
ST10G007910Phosphoenolpyruvate carboxylase (AHRD V1 ***- A6YM32_RICCO); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylasechr10+View
ST12G005140Phosphoenolpyruvate carboxylase 1 (AHRD V1 ***- Q9SCB3_SOLLC); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylase Phosphoenolpyruvate carboxylasechr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G10200No description available.scaffold_7-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39890similar to AT1G53310|ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1)ch1-2-View
TP3G13150similar to AT3G14940|ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G01870name=GSVIVG01014206001;chr19+View
VV12G02860name=GSVIVG01020705001;chr12-View


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Gene id
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Description
Chromosome
Strand