Anchorpoints

Gene id
AT1G53300
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G14950tetratricopetide-repeat thioredoxin-like 2 (TTL2); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 3 (TAIR:AT2G42580.1); Has 24503 Blast hits to 12270 proteins in 1068 species: Archae - 758; Bacteria - 6003; Metazoa - 6270; Fungi - 2431; Plants - 1839; Viruses - 18; Other Eukaryotes - 7184 (source: NCBI BLink). Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. tetratricopetide-repeat thioredoxin-like 23-View
AT2G42580tetratricopetide-repeat thioredoxin-like 3 Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. tetratricopetide-repeat thioredoxin-like 3 (TTL3); FUNCTIONS IN: binding; INVOLVED IN: brassinosteroid mediated signaling pathway, auxin mediated signaling pathway, leaf vascular tissue pattern formation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 4 (TAIR:AT3G58620.1); Has 21212 Blast hits to 11305 proteins in 1032 species: Archae - 491; Bacteria - 3820; Metazoa - 5890; Fungi - 2224; Plants - 2157; Viruses - 6; Other Eukaryotes - 6624 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G15720No description available.scaffold_3-View
AL1G48390No description available.scaffold_1+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00021G00340No description available.scaffold00021+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G16840No description available.A05-View
BR08G01390No description available.A08-View
BR05G28090No description available.A05+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G11540No description available.Chr11-View
CL09G10900No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00081G00500No description available.CM3.5_scaffold00081+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G40540No description available.scaffold_1+View
CRU_003G13890No description available.scaffold_3-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G09960No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G18390DnaJ homolog subfamily C member 7 homolog (probable)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G33850No description available.Gm06-View
GM13G34610No description available.Gm13-View
GM12G35780No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G06180No description available.Chr02-View
GR06G00170No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G004600No description available.chr3-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G023600No description available.11+View
MD10G005040No description available.10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03741G00450No description available.scaffold03741-View
ME02610G00060No description available.scaffold02610+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G078020TPR repeat thioredoxin TTL1-like proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G16000No description available.scaffold_4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G39260No description available.Chr01-View
PT11G11150No description available.Chr11-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30150G00210No description available.30150+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G007220Tetratricopeptide repeat domain protein (AHRD V1 **-- B4W421_9CYAN)%3B contains Interpro domain(s) IPR015609 Molecular chaperone%2C heat shock protein%2C Hsp40%2C DnaJch10+View
SL07G062580DnaJ homolog subfamily C member 7 (AHRD V1 *--- B5X1N5_SALSA)%3B contains Interpro domain(s) IPR015609 Molecular chaperone%2C heat shock protein%2C Hsp40%2C DnaJch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G007950Tetratricopeptide repeat protein 2-like (AHRD V1 **-- Q5ZDK5_ORYSJ); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJchr10-View
ST07G024660DnaJ homolog subfamily C member 7 (AHRD V1 *--- C1C1D2_9MAXI); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJchr07+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G10110No description available.scaffold_7+View
TC0001G14540No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39880similar to AT1G53300|TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1)ch1-2+View
TP3G13160similar to AT3G14950|TTL2 (Tetratricopetide-repeat Thioredoxin-Like 2)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G01930name=GSVIVG01014216001;chr19-View
VV12G02800name=GSVIVG01020699001;chr12-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G01100No description available.3-View
ZM03G39900No description available.3+View


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Gene id
Species
Description
Chromosome
Strand