Anchorpoints
- Gene id
- AT1G52360
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G15980 | Coatomer, beta' subunit Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Coatomer, beta' subunit (InterPro:IPR016453), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1). | 3 | - | View |
AT1G79990 | structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, endomembrane system, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), Integral membrane protein SYS1-related (InterPro:IPR019185), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74874 Blast hits to 32688 proteins in 816 species: Archae - 58; Bacteria - 8441; Metazoa - 30042; Fungi - 16255; Plants - 9898; Viruses - 0; Other Eukaryotes - 10180 (source: NCBI BLink). structural molecules | 1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G29800 | No description available. | scaffold_2 | - | View |
AL1G47340 | No description available. | scaffold_1 | + | View |
AL3G16980 | No description available. | scaffold_3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G32920 | No description available. | A01 | + | View |
BR05G17310 | No description available. | A05 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G16540 | No description available. | Bvchr9.sca026 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G01900 | No description available. | Chr9 | + | View |
CL07G13190 | No description available. | Chr7 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00067G00040 | No description available. | CM3.5_scaffold00067 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G14950 | No description available. | scaffold_3 | - | View |
CRU_001G39430 | No description available. | scaffold_1 | + | View |
CRU_002G26070 | No description available. | scaffold_2 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G25260 | No description available. | scaffold_6 | - | View |
EG0010G25530 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G00790 | Coatomer subunit beta'-1 (Beta'-COP 1) (putative) | LG1 | - | View |
FV6G16530 | Coatomer subunit beta'-1 (Beta'-COP 1) (similar to) | LG6 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G22140 | No description available. | Gm08 | + | View |
GM15G01680 | No description available. | Gm15 | - | View |
GM13G43680 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G13280 | No description available. | Chr09 | - | View |
GR06G09900 | No description available. | Chr06 | + | View |
GR11G07720 | No description available. | Chr11 | + | View |
GR02G05890 | No description available. | Chr02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD17G015640 | No description available. | 17 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G102267 | coatomer subunit beta-like protein | chr2 | + | View |
MT4G011950 | coatomer subunit beta-like protein | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G05820 | No description available. | scaffold_3 | + | View |
PPE_007G24720 | No description available. | scaffold_7 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G17920 | No description available. | Chr01 | - | View |
PT03G05630 | No description available. | Chr03 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G066730 | Coatomer beta%26apos subunit (AHRD V1 ***- Q0CXS2_ASPTN)%3B contains Interpro domain(s) IPR016453 Coatomer%2C beta' subunit | ch06 | + | View |
SL12G043000 | Coatomer beta%26apos subunit (AHRD V1 ***- Q0CXS2_ASPTN)%3B contains Interpro domain(s) IPR016453 Coatomer%2C beta' subunit | ch12 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G036850 | Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr03 | + | View |
ST06G023220 | Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR016453 Coatomer, beta' subunit | chr06 | + | View |
ST12G021850 | Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR016453 Coatomer, beta' subunit | chr12 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G08580 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G14330 | similar to AT3G15980|coatomer protein complex, subunit beta 2 (beta prime), putative | ch3-1 | - | View |
TP1G38970 | similar to AT1G52360|coatomer protein complex, subunit beta 2 (beta prime), putative | ch1-2 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G05430 | name=GSVIVG01015415001; | chr11 | + | View |