PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AT1G51420
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G52340	sucrose-6F-phosphate phosphohydrolase 2 sucrose-phosphatase (SPP2) sucrose-6F-phosphate phosphohydrolase 2 (SPP2); FUNCTIONS IN: phosphatase activity, magnesium ion binding, catalytic activity, sucrose-phosphatase activity; INVOLVED IN: sucrose biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose-phosphate phosphatase (InterPro:IPR006378), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847); BEST Arabidopsis thaliana protein match is: Sucrose-6F-phosphate phosphohydrolase family protein (TAIR:AT2G35840.3); Has 881 Blast hits to 877 proteins in 325 species: Archae - 7; Bacteria - 649; Metazoa - 0; Fungi - 0; Plants - 174; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).	3	+	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL1G46180	No description available.	scaffold_1	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR05G17820	No description available.	A05	+	View
BR08G02840	No description available.	A08	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_001G38400	No description available.	scaffold_1	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP5G09940	similar to AT3G52340\|SPP2 (SUCROSE-6F-PHOSPHATE PHOSPHOHYDROLASE 2)	ch5-1	-	View
TP1G38100	similar to AT1G51420\|SPP1 (SUCROSE-PHOSPHATASE 1)	ch1-2	-	View